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Items: 1 to 20 of 99

1.

A novel extracellular metallopeptidase domain shared by animal host-associated mutualistic and pathogenic microbes.

Nakjang S, Ndeh DA, Wipat A, Bolam DN, Hirt RP.

PLoS One. 2012;7(1):e30287. doi: 10.1371/journal.pone.0030287. Epub 2012 Jan 27.

2.

Polymorphic toxin systems: Comprehensive characterization of trafficking modes, processing, mechanisms of action, immunity and ecology using comparative genomics.

Zhang D, de Souza RF, Anantharaman V, Iyer LM, Aravind L.

Biol Direct. 2012 Jun 25;7:18. doi: 10.1186/1745-6150-7-18.

3.

CLCAs - a family of metalloproteases of intriguing phylogenetic distribution and with cases of substituted catalytic sites.

Lenart A, Dudkiewicz M, Grynberg M, Pawłowski K.

PLoS One. 2013 May 9;8(5):e62272. doi: 10.1371/journal.pone.0062272. Print 2013.

4.

Identification and characterization of human archaemetzincin-1 and -2, two novel members of a family of metalloproteases widely distributed in Archaea.

Díaz-Perales A, Quesada V, Peinado JR, Ugalde AP, Alvarez J, Suárez MF, Gomis-Rüth FX, López-Otín C.

J Biol Chem. 2005 Aug 26;280(34):30367-75. Epub 2005 Jun 22.

5.
6.

Genetic and molecular analysis of nematode-microbe interactions.

Tan MW, Shapira M.

Cell Microbiol. 2011 Apr;13(4):497-507. doi: 10.1111/j.1462-5822.2011.01570.x. Epub 2011 Jan 30. Review.

PMID:
21276170
7.

Multifunctional nutrient-binding proteins adapt human symbiotic bacteria for glycan competition in the gut by separately promoting enhanced sensing and catalysis.

Cameron EA, Kwiatkowski KJ, Lee BH, Hamaker BR, Koropatkin NM, Martens EC.

MBio. 2014 Sep 9;5(5):e01441-14. doi: 10.1128/mBio.01441-14.

8.

Isolation and characterization of metalloproteases with a novel domain structure by construction and screening of metagenomic libraries.

Waschkowitz T, Rockstroh S, Daniel R.

Appl Environ Microbiol. 2009 Apr;75(8):2506-16. doi: 10.1128/AEM.02136-08. Epub 2009 Feb 13.

9.

Structure and computational analysis of a novel protein with metallopeptidase-like and circularly permuted winged-helix-turn-helix domains reveals a possible role in modified polysaccharide biosynthesis.

Das D, Murzin AG, Rawlings ND, Finn RD, Coggill P, Bateman A, Godzik A, Aravind L.

BMC Bioinformatics. 2014 Mar 19;15:75. doi: 10.1186/1471-2105-15-75.

10.

Disintegrin-like/cysteine-rich domains of the reprolysin HF3: Site-directed mutagenesis reveals essential role of specific residues.

Menezes MC, de Oliveira AK, Melo RL, Lopes-Ferreira M, Rioli V, Balan A, Paes Leme AF, Serrano SM.

Biochimie. 2011 Feb;93(2):345-51. doi: 10.1016/j.biochi.2010.10.007. Epub 2010 Oct 16.

PMID:
20955756
11.

Structural and functional characterization of binding sites in metallocarboxypeptidases based on Optimal Docking Area analysis.

Fernández D, Vendrell J, Avilés FX, Fernández-Recio J.

Proteins. 2007 Jul 1;68(1):131-44.

PMID:
17407161
12.

News from an ancient world: two novel astacin metalloproteases from the horseshoe crab.

Becker-Pauly C, Bruns BC, Damm O, Schütte A, Hammouti K, Burmester T, Stöcker W.

J Mol Biol. 2009 Jan 9;385(1):236-48. doi: 10.1016/j.jmb.2008.10.062. Epub 2008 Oct 30.

PMID:
18996129
13.

Human extravillous trophoblasts express laeverin, a novel protein that belongs to membrane-bound gluzincin metallopeptidases.

Fujiwara H, Higuchi T, Yamada S, Hirano T, Sato Y, Nishioka Y, Yoshioka S, Tatsumi K, Ueda M, Maeda M, Fujii S.

Biochem Biophys Res Commun. 2004 Jan 23;313(4):962-8.

PMID:
14706636
14.

Allometry of animal-microbe interactions and global census of animal-associated microbes.

Kieft TL, Simmons KA.

Proc Biol Sci. 2015 Jul 7;282(1810). pii: 20150702. doi: 10.1098/rspb.2015.0702.

15.

New mini- zincin structures provide a minimal scaffold for members of this metallopeptidase superfamily.

Trame CB, Chang Y, Axelrod HL, Eberhardt RY, Coggill P, Punta M, Rawlings ND.

BMC Bioinformatics. 2014 Jan 3;15:1. doi: 10.1186/1471-2105-15-1.

16.

Trichomonas vaginalis vast BspA-like gene family: evidence for functional diversity from structural organisation and transcriptomics.

Noël CJ, Diaz N, Sicheritz-Ponten T, Safarikova L, Tachezy J, Tang P, Fiori PL, Hirt RP.

BMC Genomics. 2010 Feb 8;11:99. doi: 10.1186/1471-2164-11-99.

17.

An expanded family of fungalysin extracellular metallopeptidases of Coprinopsis cinerea.

Lilly WW, Stajich JE, Pukkila PJ, Wilke SK, Inoguchi N, Gathman AC.

Mycol Res. 2008 Mar;112(Pt 3):389-98. doi: 10.1016/j.mycres.2007.11.013. Epub 2007 Dec 14.

PMID:
18313909
18.

The cysteine-rich domain of snake venom metalloproteinases is a ligand for von Willebrand factor A domains: role in substrate targeting.

Serrano SM, Kim J, Wang D, Dragulev B, Shannon JD, Mann HH, Veit G, Wagener R, Koch M, Fox JW.

J Biol Chem. 2006 Dec 29;281(52):39746-56. Epub 2006 Oct 13.

20.

Structural and evolutionary divergence of cyclic nucleotide binding domains in eukaryotic pathogens: Implications for drug design.

Mohanty S, Kennedy EJ, Herberg FW, Hui R, Taylor SS, Langsley G, Kannan N.

Biochim Biophys Acta. 2015 Oct;1854(10 Pt B):1575-85. doi: 10.1016/j.bbapap.2015.03.012. Epub 2015 Apr 3.

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