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Items: 1 to 20 of 104


Mispaired rNMPs in DNA are mutagenic and are targets of mismatch repair and RNases H.

Shen Y, Koh KD, Weiss B, Storici F.

Nat Struct Mol Biol. 2011 Dec 4;19(1):98-104. doi: 10.1038/nsmb.2176.


Redundancy in ribonucleotide excision repair: Competition, compensation, and cooperation.

Vaisman A, Woodgate R.

DNA Repair (Amst). 2015 May;29:74-82. doi: 10.1016/j.dnarep.2015.02.008. Review.


Removal of misincorporated ribonucleotides from prokaryotic genomes: an unexpected role for nucleotide excision repair.

Vaisman A, McDonald JP, Huston D, Kuban W, Liu L, Van Houten B, Woodgate R.

PLoS Genet. 2013 Nov;9(11):e1003878. doi: 10.1371/journal.pgen.1003878.


Mutagenic processing of ribonucleotides in DNA by yeast topoisomerase I.

Kim N, Huang SN, Williams JS, Li YC, Clark AB, Cho JE, Kunkel TA, Pommier Y, Jinks-Robertson S.

Science. 2011 Jun 24;332(6037):1561-4. doi: 10.1126/science.1205016.


Mismatch repair-independent tandem repeat sequence instability resulting from ribonucleotide incorporation by DNA polymerase ε.

Clark AB, Lujan SA, Kissling GE, Kunkel TA.

DNA Repair (Amst). 2011 May 5;10(5):476-82. doi: 10.1016/j.dnarep.2011.02.001.


Identification of proteins of Escherichia coli and Saccharomyces cerevisiae that specifically bind to C/C mismatches in DNA.

Nakahara T, Zhang QM, Hashiguchi K, Yonei S.

Nucleic Acids Res. 2000 Jul 1;28(13):2551-6.


Cost of rNTP/dNTP pool imbalance at the replication fork.

Yao NY, Schroeder JW, Yurieva O, Simmons LA, O'Donnell ME.

Proc Natl Acad Sci U S A. 2013 Aug 6;110(32):12942-7. doi: 10.1073/pnas.1309506110.


Ribonucleotides misincorporated into DNA act as strand-discrimination signals in eukaryotic mismatch repair.

Ghodgaonkar MM, Lazzaro F, Olivera-Pimentel M, Artola-Borán M, Cejka P, Reijns MA, Jackson AP, Plevani P, Muzi-Falconi M, Jiricny J.

Mol Cell. 2013 May 9;50(3):323-32. doi: 10.1016/j.molcel.2013.03.019.


Ribonucleotides are signals for mismatch repair of leading-strand replication errors.

Lujan SA, Williams JS, Clausen AR, Clark AB, Kunkel TA.

Mol Cell. 2013 May 9;50(3):437-43. doi: 10.1016/j.molcel.2013.03.017.


Measuring the elasticity of ribonucleotide(s)-containing DNA molecules using AFM.

Koh KD, Chiu HC, Riedo E, Storici F.

Methods Mol Biol. 2015;1297:43-57. doi: 10.1007/978-1-4939-2562-9_3.


Rapid kinetics of mismatch repair of heteroduplex DNA that is formed during recombination in yeast.

Haber JE, Ray BL, Kolb JM, White CI.

Proc Natl Acad Sci U S A. 1993 Apr 15;90(8):3363-7.


Investigating the mechanisms of ribonucleotide excision repair in Escherichia coli.

Vaisman A, McDonald JP, Noll S, Huston D, Loeb G, Goodman MF, Woodgate R.

Mutat Res. 2014 Mar;761:21-33. doi: 10.1016/j.mrfmmm.2014.01.005.


Mechanisms employed by Escherichia coli to prevent ribonucleotide incorporation into genomic DNA by Pol V.

McDonald JP, Vaisman A, Kuban W, Goodman MF, Woodgate R.

PLoS Genet. 2012;8(11):e1003030. doi: 10.1371/journal.pgen.1003030.


Frequent incorporation of ribonucleotides during HIV-1 reverse transcription and their attenuated repair in macrophages.

Kennedy EM, Amie SM, Bambara RA, Kim B.

J Biol Chem. 2012 Apr 20;287(17):14280-8. doi: 10.1074/jbc.M112.348482.


Bidirectional excision in methyl-directed mismatch repair.

Grilley M, Griffith J, Modrich P.

J Biol Chem. 1993 Jun 5;268(16):11830-7.


Proofreading of ribonucleotides inserted into DNA by yeast DNA polymerase ɛ.

Williams JS, Clausen AR, Nick McElhinny SA, Watts BE, Johansson E, Kunkel TA.

DNA Repair (Amst). 2012 Aug 1;11(8):649-56. doi: 10.1016/j.dnarep.2012.05.004.


RNase H and postreplication repair protect cells from ribonucleotides incorporated in DNA.

Lazzaro F, Novarina D, Amara F, Watt DL, Stone JE, Costanzo V, Burgers PM, Kunkel TA, Plevani P, Muzi-Falconi M.

Mol Cell. 2012 Jan 13;45(1):99-110. doi: 10.1016/j.molcel.2011.12.019.

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