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Items: 1 to 20 of 94

1.

Comparison between procedures using SDS for shotgun proteomic analyses of complex samples.

Bereman MS, Egertson JD, MacCoss MJ.

Proteomics. 2011 Jul;11(14):2931-5. doi: 10.1002/pmic.201100045. Epub 2011 Jun 8.

2.

Modified filter-aided sample preparation (FASP) method increases peptide and protein identifications for shotgun proteomics.

Ni MW, Wang L, Chen W, Mou HZ, Zhou J, Zheng ZG.

Rapid Commun Mass Spectrom. 2017 Jan 30;31(2):171-178. doi: 10.1002/rcm.7779.

PMID:
27794190
3.

Protein identification and quantification from riverbank grape, Vitis riparia: Comparing SDS-PAGE and FASP-GPF techniques for shotgun proteomic analysis.

George IS, Fennell AY, Haynes PA.

Proteomics. 2015 Sep;15(17):3061-5. doi: 10.1002/pmic.201500085. Epub 2015 Jun 22.

PMID:
25929842
4.

Comparison of surfactant-assisted shotgun methods using acid-labile surfactants and sodium dodecyl sulfate for membrane proteome analysis.

Wu F, Sun D, Wang N, Gong Y, Li L.

Anal Chim Acta. 2011 Jul 18;698(1-2):36-43. doi: 10.1016/j.aca.2011.04.039. Epub 2011 Apr 28.

PMID:
21645657
5.

Comparison of sodium dodecyl sulfate depletion techniques for proteome analysis by mass spectrometry.

Kachuk C, Stephen K, Doucette A.

J Chromatogr A. 2015 Oct 30;1418:158-66. doi: 10.1016/j.chroma.2015.09.042. Epub 2015 Sep 21.

PMID:
26422304
7.

Comparison of two FFPE preparation methods using label-free shotgun proteomics: Application to tissues of diverticulitis patients.

Quesada-Calvo F, Bertrand V, Longuespée R, Delga A, Mazzucchelli G, Smargiasso N, Baiwir D, Delvenne P, Malaise M, De Pauw-Gillet MC, De Pauw E, Louis E, Meuwis MA.

J Proteomics. 2015 Jan 1;112:250-61. doi: 10.1016/j.jprot.2014.08.013. Epub 2014 Sep 10.

PMID:
25218866
8.

Shotgun analysis of membrane proteomes by an improved SDS-assisted sample preparation method coupled with liquid chromatography-tandem mass spectrometry.

Lin Y, Jiang H, Yan Y, Peng B, Chen J, Lin H, Liu Z.

J Chromatogr B Analyt Technol Biomed Life Sci. 2012 Dec 12;911:6-14. doi: 10.1016/j.jchromb.2012.10.016. Epub 2012 Oct 23.

PMID:
23217299
9.

Improvement of a sample preparation method assisted by sodium deoxycholate for mass-spectrometry-based shotgun membrane proteomics.

Lin Y, Lin H, Liu Z, Wang K, Yan Y.

J Sep Sci. 2014 Nov;37(22):3321-9. doi: 10.1002/jssc.201400569. Epub 2014 Oct 13.

PMID:
25196059
10.

Efficient marginalization to compute protein posterior probabilities from shotgun mass spectrometry data.

Serang O, MacCoss MJ, Noble WS.

J Proteome Res. 2010 Oct 1;9(10):5346-57. doi: 10.1021/pr100594k.

11.

Evaluation of the combinative application of SDS and sodium deoxycholate to the LC-MS-based shotgun analysis of membrane proteomes.

Lin Y, Wang K, Yan Y, Lin H, Peng B, Liu Z.

J Sep Sci. 2013 Sep;36(18):3026-34. doi: 10.1002/jssc.201300413. Epub 2013 Aug 2.

PMID:
23832743
13.

Cleaning up the masses: exclusion lists to reduce contamination with HPLC-MS/MS.

Hodge K, Have ST, Hutton L, Lamond AI.

J Proteomics. 2013 Aug 2;88:92-103. doi: 10.1016/j.jprot.2013.02.023. Epub 2013 Mar 15.

14.
15.

Evaluation of SDS depletion using an affinity spin column and IMS-MS detection.

Hengel SM, Floyd E, Baker ES, Zhao R, Wu S, Paša-Tolić L.

Proteomics. 2012 Nov;12(21):3138-42. doi: 10.1002/pmic.201200168. Epub 2012 Sep 24.

16.

A two-stage spin cartridge for integrated protein precipitation, digestion and SDS removal in a comparative bottom-up proteomics workflow.

Crowell AM, MacLellan DL, Doucette AA.

J Proteomics. 2015 Apr 6;118:140-50. doi: 10.1016/j.jprot.2014.09.030. Epub 2014 Oct 12.

PMID:
25316050
17.
18.

Integrated SDS removal and protein digestion by hollow fiber membrane based device for SDS-assisted proteome analysis.

Xia S, Yuan H, Chen Y, Liang Z, Zhang L, Zhang Y.

Talanta. 2015 Aug 15;141:235-8. doi: 10.1016/j.talanta.2015.04.011. Epub 2015 Apr 10.

PMID:
25966408
19.

Universal sample preparation method for proteome analysis.

Wiśniewski JR, Zougman A, Nagaraj N, Mann M.

Nat Methods. 2009 May;6(5):359-62. doi: 10.1038/nmeth.1322. Epub 2009 Apr 19.

PMID:
19377485
20.

Perfluorooctanoic acid and ammonium perfluorooctanoate: volatile surfactants for proteome analysis?

Vieira DB, Crowell AM, Doucette AA.

Rapid Commun Mass Spectrom. 2012 Mar 15;26(5):523-31. doi: 10.1002/rcm.6127.

PMID:
22302492

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