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Items: 1 to 20 of 100

1.

Amborella not a "basal angiosperm"? Not so fast.

Soltis DE, Soltis PS.

Am J Bot. 2004 Jun;91(6):997-1001. doi: 10.3732/ajb.91.6.997.

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Identifying the basal angiosperm node in chloroplast genome phylogenies: sampling one's way out of the Felsenstein zone.

Leebens-Mack J, Raubeson LA, Cui L, Kuehl JV, Fourcade MH, Chumley TW, Boore JL, Jansen RK, depamphilis CW.

Mol Biol Evol. 2005 Oct;22(10):1948-63. Epub 2005 Jun 8.

PMID:
15944438
4.

Another look at the root of the angiosperms reveals a familiar tale.

Drew BT, Ruhfel BR, Smith SA, Moore MJ, Briggs BG, Gitzendanner MA, Soltis PS, Soltis DE.

Syst Biol. 2014 May;63(3):368-82. doi: 10.1093/sysbio/syt108. Epub 2014 Jan 3.

PMID:
24391149
5.

The chloroplast genome of Nymphaea alba: whole-genome analyses and the problem of identifying the most basal angiosperm.

Goremykin VV, Hirsch-Ernst KI, Wölfl S, Hellwig FH.

Mol Biol Evol. 2004 Jul;21(7):1445-54. Epub 2004 Apr 14.

PMID:
15084683
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8.

Complete plastid genome sequences of Drimys, Liriodendron, and Piper: implications for the phylogenetic relationships of magnoliids.

Cai Z, Penaflor C, Kuehl JV, Leebens-Mack J, Carlson JE, dePamphilis CW, Boore JL, Jansen RK.

BMC Evol Biol. 2006 Oct 4;6:77.

9.

Complete cpDNA genome sequence of Smilax china and phylogenetic placement of Liliales--influences of gene partitions and taxon sampling.

Liu J, Qi ZC, Zhao YP, Fu CX, Jenny Xiang QY.

Mol Phylogenet Evol. 2012 Sep;64(3):545-62. doi: 10.1016/j.ympev.2012.05.010. Epub 2012 May 27.

PMID:
22643288
10.

Complete chloroplast genome sequence of Elodea canadensis and comparative analyses with other monocot plastid genomes.

Huotari T, Korpelainen H.

Gene. 2012 Oct 15;508(1):96-105. doi: 10.1016/j.gene.2012.07.020. Epub 2012 Jul 25.

PMID:
22841789
11.

A new test of phylogenetic model fitness addresses the issue of the basal angiosperm phylogeny.

Goremykin VV, Hellwig FH.

Gene. 2006 Oct 15;381:81-91. Epub 2006 Jul 18.

PMID:
16959440
12.

The chloroplast genome of Phalaenopsis aphrodite (Orchidaceae): comparative analysis of evolutionary rate with that of grasses and its phylogenetic implications.

Chang CC, Lin HC, Lin IP, Chow TY, Chen HH, Chen WH, Cheng CH, Lin CY, Liu SM, Chang CC, Chaw SM.

Mol Biol Evol. 2006 Feb;23(2):279-91. Epub 2005 Oct 5.

PMID:
16207935
13.

The earliest angiosperms: evidence from mitochondrial, plastid and nuclear genomes.

Qiu YL, Lee J, Bernasconi-Quadroni F, Soltis DE, Soltis PS, Zanis M, Zimmer EA, Chen Z, Savolainen V, Chase MW.

Nature. 1999 Nov 25;402(6760):404-7. Erratum in: Nature 2000 May 4;405(6782):101.

PMID:
10586879
14.

Analysis of the Amborella trichopoda chloroplast genome sequence suggests that amborella is not a basal angiosperm.

Goremykin VV, Hirsch-Ernst KI, Wolfl S, Hellwig FH.

Mol Biol Evol. 2003 Sep;20(9):1499-505. Epub 2003 Jun 27.

PMID:
12832641
15.

Evolution of genome size in the angiosperms.

Soltis DE, Soltis PS, Bennett MD, Leitch IJ.

Am J Bot. 2003 Nov;90(11):1596-603. doi: 10.3732/ajb.90.11.1596.

16.

Hydatellaceae identified as a new branch near the base of the angiosperm phylogenetic tree.

Saarela JM, Rai HS, Doyle JA, Endress PK, Mathews S, Marchant AD, Briggs BG, Graham SW.

Nature. 2007 Mar 15;446(7133):312-5.

PMID:
17361182
17.

Noncoding plastid trnT-trnF sequences reveal a well resolved phylogeny of basal angiosperms.

Borsch T, Hilu KW, Quandt D, Wilde V, Neinhuis C, Barthlott W.

J Evol Biol. 2003 Jul;16(4):558-76.

18.

Coalescent versus concatenation methods and the placement of Amborella as sister to water lilies.

Xi Z, Liu L, Rest JS, Davis CC.

Syst Biol. 2014 Nov;63(6):919-32. doi: 10.1093/sysbio/syu055. Epub 2014 Jul 30.

PMID:
25077515
19.

The phylogenetic position of red algae revealed by multiple nuclear genes from mitochondria-containing eukaryotes and an alternative hypothesis on the origin of plastids.

Nozaki H, Matsuzaki M, Takahara M, Misumi O, Kuroiwa H, Hasegawa M, Shin-i T, Kohara Y, Ogasawara N, Kuroiwa T.

J Mol Evol. 2003 Apr;56(4):485-97.

PMID:
12664168
20.

Reconstructing the ancestral female gametophyte of angiosperms: Insights from Amborella and other ancient lineages of flowering plants.

Friedman WE, Ryerson KC.

Am J Bot. 2009 Jan;96(1):129-43. doi: 10.3732/ajb.0800311. Epub 2008 Dec 24.

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