Format
Sort by
Items per page

Send to

Choose Destination

Links from PubMed

Items: 1 to 20 of 111

1.

Improving proteome coverage on a LTQ-Orbitrap using design of experiments.

Andrews GL, Dean RA, Hawkridge AM, Muddiman DC.

J Am Soc Mass Spectrom. 2011 Apr;22(4):773-83. doi: 10.1007/s13361-011-0075-2. Epub 2011 Feb 15.

2.

Factorial experimental designs elucidate significant variables affecting data acquisition on a quadrupole Orbitrap mass spectrometer.

Randall SM, Cardasis HL, Muddiman DC.

J Am Soc Mass Spectrom. 2013 Oct;24(10):1501-12. doi: 10.1007/s13361-013-0693-y. Epub 2013 Aug 3.

PMID:
23913023
3.

Evaluation and optimization of mass spectrometric settings during data-dependent acquisition mode: focus on LTQ-Orbitrap mass analyzers.

Kalli A, Smith GT, Sweredoski MJ, Hess S.

J Proteome Res. 2013 Jul 5;12(7):3071-86. doi: 10.1021/pr3011588. Epub 2013 May 31.

4.

Effect of mass spectrometric parameters on peptide and protein identification rates for shotgun proteomic experiments on an LTQ-orbitrap mass analyzer.

Kalli A, Hess S.

Proteomics. 2012 Jan;12(1):21-31. doi: 10.1002/pmic.201100464. Epub 2011 Nov 29.

PMID:
22065615
5.

Spectral counting robust on high mass accuracy mass spectrometers.

Hoehenwarter W, Wienkoop S.

Rapid Commun Mass Spectrom. 2010 Dec 30;24(24):3609-14. doi: 10.1002/rcm.4818.

PMID:
21108307
6.

Optimization of Search Engines and Postprocessing Approaches to Maximize Peptide and Protein Identification for High-Resolution Mass Data.

Tu C, Sheng Q, Li J, Ma D, Shen X, Wang X, Shyr Y, Yi Z, Qu J.

J Proteome Res. 2015 Nov 6;14(11):4662-73. doi: 10.1021/acs.jproteome.5b00536. Epub 2015 Sep 30.

7.

Ultra high resolution linear ion trap Orbitrap mass spectrometer (Orbitrap Elite) facilitates top down LC MS/MS and versatile peptide fragmentation modes.

Michalski A, Damoc E, Lange O, Denisov E, Nolting D, Müller M, Viner R, Schwartz J, Remes P, Belford M, Dunyach JJ, Cox J, Horning S, Mann M, Makarov A.

Mol Cell Proteomics. 2012 Mar;11(3):O111.013698. doi: 10.1074/mcp.O111.013698. Epub 2011 Dec 9.

8.

System-wide perturbation analysis with nearly complete coverage of the yeast proteome by single-shot ultra HPLC runs on a bench top Orbitrap.

Nagaraj N, Kulak NA, Cox J, Neuhauser N, Mayr K, Hoerning O, Vorm O, Mann M.

Mol Cell Proteomics. 2012 Mar;11(3):M111.013722. doi: 10.1074/mcp.M111.013722. Epub 2011 Oct 20.

9.

Assessment of resolution parameters for CID-based shotgun proteomic experiments on the LTQ-Orbitrap mass spectrometer.

Kim MS, Kandasamy K, Chaerkady R, Pandey A.

J Am Soc Mass Spectrom. 2010 Sep;21(9):1606-11. doi: 10.1016/j.jasms.2010.04.011. Epub 2010 Apr 24.

10.

Dual-pressure linear ion trap mass spectrometer improving the analysis of complex protein mixtures.

Second TP, Blethrow JD, Schwartz JC, Merrihew GE, MacCoss MJ, Swaney DL, Russell JD, Coon JJ, Zabrouskov V.

Anal Chem. 2009 Sep 15;81(18):7757-65. doi: 10.1021/ac901278y.

11.

Nanospray FAIMS fractionation provides significant increases in proteome coverage of unfractionated complex protein digests.

Swearingen KE, Hoopmann MR, Johnson RS, Saleem RA, Aitchison JD, Moritz RL.

Mol Cell Proteomics. 2012 Apr;11(4):M111.014985. doi: 10.1074/mcp.M111.014985. Epub 2011 Dec 20.

12.

Systematical optimization of reverse-phase chromatography for shotgun proteomics.

Xu P, Duong DM, Peng J.

J Proteome Res. 2009 Aug;8(8):3944-50. doi: 10.1021/pr900251d.

14.

An exclusion list based label-free proteome quantification approach using an LTQ Orbitrap.

Muntel J, Hecker M, Becher D.

Rapid Commun Mass Spectrom. 2012 Mar 30;26(6):701-9. doi: 10.1002/rcm.6147.

PMID:
22328225
15.

Investigating Acquisition Performance on the Orbitrap Fusion When Using Tandem MS/MS/MS Scanning with Isobaric Tags.

Hughes CS, Spicer V, Krokhin OV, Morin GB.

J Proteome Res. 2017 May 5;16(5):1839-1846. doi: 10.1021/acs.jproteome.7b00091. Epub 2017 Apr 20.

PMID:
28418257
16.

One-hour proteome analysis in yeast.

Richards AL, Hebert AS, Ulbrich A, Bailey DJ, Coughlin EE, Westphall MS, Coon JJ.

Nat Protoc. 2015 May;10(5):701-14. doi: 10.1038/nprot.2015.040. Epub 2015 Apr 9.

PMID:
25855955
17.

Comparative evaluation of mass spectrometry platforms used in large-scale proteomics investigations.

Elias JE, Haas W, Faherty BK, Gygi SP.

Nat Methods. 2005 Sep;2(9):667-75.

PMID:
16118637
18.

Comparison of detergent-based sample preparation workflows for LTQ-Orbitrap analysis of the Escherichia coli proteome.

Tanca A, Biosa G, Pagnozzi D, Addis MF, Uzzau S.

Proteomics. 2013 Sep;13(17):2597-607. doi: 10.1002/pmic.201200478. Epub 2013 Aug 7.

PMID:
23784971
19.
20.

Postexperiment monoisotopic mass filtering and refinement (PE-MMR) of tandem mass spectrometric data increases accuracy of peptide identification in LC/MS/MS.

Shin B, Jung HJ, Hyung SW, Kim H, Lee D, Lee C, Yu MH, Lee SW.

Mol Cell Proteomics. 2008 Jun;7(6):1124-34. doi: 10.1074/mcp.M700419-MCP200. Epub 2008 Feb 25.

Supplemental Content

Support Center