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Local conformational stability of HIV-1 gp120 in unliganded and CD4-bound states as defined by amide hydrogen/deuterium exchange.

Kong L, Huang CC, Coales SJ, Molnar KS, Skinner J, Hamuro Y, Kwong PD.

J Virol. 2010 Oct;84(19):10311-21. doi: 10.1128/JVI.00688-10.


Range of CD4-Bound Conformations of HIV-1 gp120, as Defined Using Conditional CD4-Induced Antibodies.

Kaplan G, Roitburd-Berman A, Lewis GK, Gershoni JM.

J Virol. 2016 May;90(9):4481-93. doi: 10.1128/JVI.03206-15.


CD4 binding partially locks the bridging sheet in gp120 but leaves the beta2/3 strands flexible.

Pan Y, Ma B, Nussinov R.

J Mol Biol. 2005 Jul 15;350(3):514-27.


Unliganded HIV-1 gp120 core structures assume the CD4-bound conformation with regulation by quaternary interactions and variable loops.

Kwon YD, Finzi A, Wu X, Dogo-Isonagie C, Lee LK, Moore LR, Schmidt SD, Stuckey J, Yang Y, Zhou T, Zhu J, Vicic DA, Debnath AK, Shapiro L, Bewley CA, Mascola JR, Sodroski JG, Kwong PD.

Proc Natl Acad Sci U S A. 2012 Apr 10;109(15):5663-8. doi: 10.1073/pnas.1112391109.


Spontaneous rearrangement of the β20/β21 strands in simulations of unliganded HIV-1 glycoprotein, gp120.

Shrivastava IH, Wendel K, LaLonde JM.

Biochemistry. 2012 Oct 2;51(39):7783-93. doi: 10.1021/bi300878d.


Molecular motions of human HIV-1 gp120 envelope glycoproteins.

Liu SQ, Liu SX, Fu YX.

J Mol Model. 2008 Sep;14(9):857-70. doi: 10.1007/s00894-008-0327-7.


Molecular motions in HIV-1 gp120 mutants reveal their preferences for different conformations.

Liu SQ, Liu CQ, Fu YX.

J Mol Graph Model. 2007 Jul;26(1):306-18.


The highly conserved layer-3 component of the HIV-1 gp120 inner domain is critical for CD4-required conformational transitions.

Désormeaux A, Coutu M, Medjahed H, Pacheco B, Herschhorn A, Gu C, Xiang SH, Mao Y, Sodroski J, Finzi A.

J Virol. 2013 Mar;87(5):2549-62. doi: 10.1128/JVI.03104-12.


NMR observation of HIV-1 gp120 conformational flexibility resulting from V3 truncation.

Moseri A, Schnur E, Noah E, Zherdev Y, Kessler N, Singhal Sinha E, Abayev M, Naider F, Scherf T, Anglister J.

FEBS J. 2014 Jul;281(13):3019-31. doi: 10.1111/febs.12839.


Topological layers in the HIV-1 gp120 inner domain regulate gp41 interaction and CD4-triggered conformational transitions.

Finzi A, Xiang SH, Pacheco B, Wang L, Haight J, Kassa A, Danek B, Pancera M, Kwong PD, Sodroski J.

Mol Cell. 2010 Mar 12;37(5):656-67. doi: 10.1016/j.molcel.2010.02.012.


NMR studies on the conformation of the CD4 36-59 peptide bound to HIV-1 gp120.

Gizachew D, Moffett DB, Busse SC, Westler WM, Dratz EA, Teintze M.

Biochemistry. 1998 Jul 28;37(30):10616-25.


Structure of HIV-1 gp120 with gp41-interactive region reveals layered envelope architecture and basis of conformational mobility.

Pancera M, Majeed S, Ban YE, Chen L, Huang CC, Kong L, Kwon YD, Stuckey J, Zhou T, Robinson JE, Schief WR, Sodroski J, Wyatt R, Kwong PD.

Proc Natl Acad Sci U S A. 2010 Jan 19;107(3):1166-71. doi: 10.1073/pnas.0911004107.


Structural analysis of a highly glycosylated and unliganded gp120-based antigen using mass spectrometry.

Wang L, Qin Y, Ilchenko S, Bohon J, Shi W, Cho MW, Takamoto K, Chance MR.

Biochemistry. 2010 Oct 26;49(42):9032-45. doi: 10.1021/bi1011332.


Lineage-specific differences between human and simian immunodeficiency virus regulation of gp120 trimer association and CD4 binding.

Finzi A, Pacheco B, Xiang SH, Pancera M, Herschhorn A, Wang L, Zeng X, Desormeaux A, Kwong PD, Sodroski J.

J Virol. 2012 Sep;86(17):8974-86. doi: 10.1128/JVI.01076-12.


Insight derived from molecular dynamics simulations into molecular motions, thermodynamics and kinetics of HIV-1 gp120.

Sang P, Yang LQ, Ji XL, Fu YX, Liu SQ.

PLoS One. 2014 Aug 8;9(8):e104714. doi: 10.1371/journal.pone.0104714.


Structure of a V3-containing HIV-1 gp120 core.

Huang CC, Tang M, Zhang MY, Majeed S, Montabana E, Stanfield RL, Dimitrov DS, Korber B, Sodroski J, Wilson IA, Wyatt R, Kwong PD.

Science. 2005 Nov 11;310(5750):1025-8.


Conformational changes of gp120 in epitopes near the CCR5 binding site are induced by CD4 and a CD4 miniprotein mimetic.

Zhang W, Canziani G, Plugariu C, Wyatt R, Sodroski J, Sweet R, Kwong P, Hendrickson W, Chaiken I.

Biochemistry. 1999 Jul 20;38(29):9405-16.


Atomic insight into the CD4 binding-induced conformational changes in HIV-1 gp120.

Hsu ST, Bonvin AM.

Proteins. 2004 May 15;55(3):582-93.

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