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Items: 1 to 20 of 110

1.

Testing SNPs and sets of SNPs for importance in association studies.

Schwender H, Ruczinski I, Ickstadt K.

Biostatistics. 2011 Jan;12(1):18-32. doi: 10.1093/biostatistics/kxq042. Epub 2010 Jul 2.

2.

Performance of random forest when SNPs are in linkage disequilibrium.

Meng YA, Yu Y, Cupples LA, Farrer LA, Lunetta KL.

BMC Bioinformatics. 2009 Mar 5;10:78. doi: 10.1186/1471-2105-10-78.

3.

Analysis of single-locus tests to detect gene/disease associations.

Roeder K, Bacanu SA, Sonpar V, Zhang X, Devlin B.

Genet Epidemiol. 2005 Apr;28(3):207-19.

PMID:
15637715
4.

Detection of inappropriate samples in association studies by an IBS-based method considering linkage disequilibrium between genetic markers.

Andoh M, Sato Y, Sakamoto H, Yoshida T, Ohtaki M.

J Hum Genet. 2010 Jul;55(7):436-40. doi: 10.1038/jhg.2010.43. Epub 2010 May 7.

PMID:
20448652
5.

Detecting genetic association through shortest paths in a bidirected graph.

Ueki M, Kawasaki Y, Tamiya G; for Alzheimer's Disease Neuroimaging Initiative.

Genet Epidemiol. 2017 Sep;41(6):481-497. doi: 10.1002/gepi.22051. Epub 2017 Jun 19.

PMID:
28626864
6.
7.

Inclusion of biological knowledge in a Bayesian shrinkage model for joint estimation of SNP effects.

Pereira M, Thompson JR, Weichenberger CX, Thomas DC, Minelli C.

Genet Epidemiol. 2017 May;41(4):320-331. doi: 10.1002/gepi.22038. Epub 2017 Apr 10.

PMID:
28393391
8.

SNP-PRAGE: SNP-based parametric robust analysis of gene set enrichment.

Lee J, Ahn S, Oh S, Weir B, Park T.

BMC Syst Biol. 2011;5 Suppl 2:S11. doi: 10.1186/1752-0509-5-S2-S11. Epub 2011 Dec 14.

9.

LDGIdb: a database of gene interactions inferred from long-range strong linkage disequilibrium between pairs of SNPs.

Wang MC, Chen FC, Chen YZ, Huang YT, Chuang TJ.

BMC Res Notes. 2012 May 2;5:212. doi: 10.1186/1756-0500-5-212.

10.

A model-based approach to selection of tag SNPs.

Nicolas P, Sun F, Li LM.

BMC Bioinformatics. 2006 Jun 15;7:303.

11.

Using propensity score adjustment method in genetic association studies.

Sengupta Chattopadhyay A, Lin YC, Hsieh AR, Chang CC, Lian IeB, Fann CS.

Comput Biol Chem. 2016 Jun;62:1-11. doi: 10.1016/j.compbiolchem.2016.02.017. Epub 2016 Mar 3.

PMID:
26991546
12.

Identification of SNP interactions using logic regression.

Schwender H, Ickstadt K.

Biostatistics. 2008 Jan;9(1):187-98. Epub 2007 Jun 19.

PMID:
17578898
13.

SNP selection for association studies: maximizing power across SNP choice and study size.

Pardi F, Lewis CM, Whittaker JC.

Ann Hum Genet. 2005 Nov;69(Pt 6):733-46.

14.

FastTagger: an efficient algorithm for genome-wide tag SNP selection using multi-marker linkage disequilibrium.

Liu G, Wang Y, Wong L.

BMC Bioinformatics. 2010 Jan 29;11:66. doi: 10.1186/1471-2105-11-66.

15.

Association between SNPs in defined functional pathways and risk of early or late toxicity as well as individual radiosensitivity.

Reuther S, Szymczak S, Raabe A, Borgmann K, Ziegler A, Petersen C, Dikomey E, Hoeller U.

Strahlenther Onkol. 2015 Jan;191(1):59-66. doi: 10.1007/s00066-014-0741-y. Epub 2014 Aug 26.

PMID:
25156511
16.

Finding associations in dense genetic maps: a genetic algorithm approach.

Clark TG, De Iorio M, Griffiths RC, Farrall M.

Hum Hered. 2005;60(2):97-108. Epub 2005 Oct 11.

PMID:
16220001
17.

Comprehensive functional annotation of seventy-one breast cancer risk Loci.

Rhie SK, Coetzee SG, Noushmehr H, Yan C, Kim JM, Haiman CA, Coetzee GA.

PLoS One. 2013 May 22;8(5):e63925. doi: 10.1371/journal.pone.0063925. Print 2013.

18.

The impact of SNP density on fine-scale patterns of linkage disequilibrium.

Ke X, Hunt S, Tapper W, Lawrence R, Stavrides G, Ghori J, Whittaker P, Collins A, Morris AP, Bentley D, Cardon LR, Deloukas P.

Hum Mol Genet. 2004 Mar 15;13(6):577-88. Epub 2004 Jan 20.

PMID:
14734624
19.

High-throughput SNP analysis for genetic association studies.

Marnellos G.

Curr Opin Drug Discov Devel. 2003 May;6(3):317-21. Review.

PMID:
12833663
20.

Evaluation of an algorithm of tagging SNPs selection by linkage disequilibrium.

Tang NL, Pharoah PD, Ma SL, Easton DF.

Clin Biochem. 2006 Mar;39(3):240-3. Epub 2006 Jan 19.

PMID:
16427037

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