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Items: 1 to 20 of 87

1.

Classification of the short-chain dehydrogenase/reductase superfamily using hidden Markov models.

Kallberg Y, Oppermann U, Persson B.

FEBS J. 2010 May;277(10):2375-86. doi: 10.1111/j.1742-4658.2010.07656.x.

2.

The plant short-chain dehydrogenase (SDR) superfamily: genome-wide inventory and diversification patterns.

Moummou H, Kallberg Y, Tonfack LB, Persson B, van der Rest B.

BMC Plant Biol. 2012 Nov 20;12:219. doi: 10.1186/1471-2229-12-219.

3.

Subdivision of the MDR superfamily of medium-chain dehydrogenases/reductases through iterative hidden Markov model refinement.

Hedlund J, Jörnvall H, Persson B.

BMC Bioinformatics. 2010 Oct 27;11:534. doi: 10.1186/1471-2105-11-534.

4.

Classification and nomenclature of the superfamily of short-chain dehydrogenases/reductases (SDRs).

Persson B, Kallberg Y.

Chem Biol Interact. 2013 Feb 25;202(1-3):111-5. doi: 10.1016/j.cbi.2012.11.009. Epub 2012 Nov 29.

PMID:
23200746
5.

Short-chain dehydrogenases/reductases (SDRs).

Kallberg Y, Oppermann U, Jörnvall H, Persson B.

Eur J Biochem. 2002 Sep;269(18):4409-17.

6.

Bioinformatic identification and characterization of new members of short-chain dehydrogenase/reductase superfamily.

Keller B, Volkmann A, Wilckens T, Moeller G, Adamski J.

Mol Cell Endocrinol. 2006 Mar 27;248(1-2):56-60. Epub 2006 Jan 10.

PMID:
16406282
7.

The SDR (short-chain dehydrogenase/reductase and related enzymes) nomenclature initiative.

Persson B, Kallberg Y, Bray JE, Bruford E, Dellaporta SL, Favia AD, Duarte RG, Jörnvall H, Kavanagh KL, Kedishvili N, Kisiela M, Maser E, Mindnich R, Orchard S, Penning TM, Thornton JM, Adamski J, Oppermann U.

Chem Biol Interact. 2009 Mar 16;178(1-3):94-8. doi: 10.1016/j.cbi.2008.10.040. Epub 2008 Nov 5.

8.

Short-chain dehydrogenases/reductases (SDR).

Jörnvall H, Persson B, Krook M, Atrian S, Gonzàlez-Duarte R, Jeffery J, Ghosh D.

Biochemistry. 1995 May 9;34(18):6003-13. Review.

PMID:
7742302
9.

Accurate domain identification with structure-anchored hidden Markov models, saHMMs.

Tångrot JE, Kågström B, Sauer UH.

Proteins. 2009 Aug 1;76(2):343-52. doi: 10.1002/prot.22349.

PMID:
19173309
10.
11.

Protein classification based on text document classification techniques.

Cheng BY, Carbonell JG, Klein-Seetharaman J.

Proteins. 2005 Mar 1;58(4):955-70.

PMID:
15645499
12.

Diversity, taxonomy and evolution of medium-chain dehydrogenase/reductase superfamily.

Riveros-Rosas H, Julián-Sánchez A, Villalobos-Molina R, Pardo JP, Piña E.

Eur J Biochem. 2003 Aug;270(16):3309-34.

13.

The human short-chain dehydrogenase/reductase (SDR) superfamily: a bioinformatics summary.

Bray JE, Marsden BD, Oppermann U.

Chem Biol Interact. 2009 Mar 16;178(1-3):99-109. doi: 10.1016/j.cbi.2008.10.058. Epub 2008 Nov 17.

PMID:
19061874
14.

Bioinformatic and biochemical characterization of DCXR and DHRS2/4 from Caenorhabditis elegans.

Kisiela M, El-Hawari Y, Martin HJ, Maser E.

Chem Biol Interact. 2011 May 30;191(1-3):75-82. doi: 10.1016/j.cbi.2011.01.034. Epub 2011 Feb 15.

PMID:
21300042
15.

Aldehyde dehydrogenase gene superfamily: the 2000 update.

Sophos NA, Pappa A, Ziegler TL, Vasiliou V.

Chem Biol Interact. 2001 Jan 30;130-132(1-3):323-37.

PMID:
11306055
16.
18.

Coenzyme-based functional assignments of short-chain dehydrogenases/reductases (SDRs).

Persson B, Kallberg Y, Oppermann U, Jörnvall H.

Chem Biol Interact. 2003 Feb 1;143-144:271-8. Review.

PMID:
12604213
19.

Immunoglobulin superfamily proteins in Caenorhabditis elegans.

Teichmann SA, Chothia C.

J Mol Biol. 2000 Mar 10;296(5):1367-83.

PMID:
10698639
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