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Items: 1 to 20 of 95

1.

Genome 10K: a proposal to obtain whole-genome sequence for 10,000 vertebrate species.

Genome 10K Community of Scientists.

J Hered. 2009 Nov-Dec;100(6):659-74. doi: 10.1093/jhered/esp086. Epub 2009 Nov 5.

2.

The Genome 10K Project: a way forward.

Koepfli KP, Paten B; Genome 10K Community of Scientists, O'Brien SJ.

Annu Rev Anim Biosci. 2015;3:57-111. doi: 10.1146/annurev-animal-090414-014900. Review.

PMID:
25689317
3.

Perspectives from the Avian Phylogenomics Project: Questions that Can Be Answered with Sequencing All Genomes of a Vertebrate Class.

Jarvis ED.

Annu Rev Anim Biosci. 2016;4:45-59. doi: 10.1146/annurev-animal-021815-111216. Review.

PMID:
26884102
4.

The fishes of Genome 10K.

Bernardi G, Wiley EO, Mansour H, Miller MR, Orti G, Haussler D, O'Brien SJ, Ryder OA, Venkatesh B.

Mar Genomics. 2012 Sep;7:3-6. doi: 10.1016/j.margen.2012.02.002. Epub 2012 Mar 24.

PMID:
22897955
5.

Comparison of RefSeq protein-coding regions in human and vertebrate genomes.

Fong JH, Murphy TD, Pruitt KD.

BMC Genomics. 2013 Sep 25;14:654. doi: 10.1186/1471-2164-14-654.

6.

Dissecting evolution and disease using comparative vertebrate genomics.

Meadows JRS, Lindblad-Toh K.

Nat Rev Genet. 2017 Oct;18(10):624-636. doi: 10.1038/nrg.2017.51. Epub 2017 Jul 24. Review.

PMID:
28736437
7.

A Comparative Study of Vertebrate Corneal Structure: The Evolution of a Refractive Lens.

Winkler M, Shoa G, Tran ST, Xie Y, Thomasy S, Raghunathan VK, Murphy C, Brown DJ, Jester JV.

Invest Ophthalmol Vis Sci. 2015 Apr;56(4):2764-72. doi: 10.1167/iovs.15-16584.

8.
9.

Evolutionary changes in CpG and methylation levels in the genome of vertebrates.

Jabbari K, Cacciò S, Païs de Barros JP, Desgrès J, Bernardi G.

Gene. 1997 Dec 31;205(1-2):109-18.

PMID:
9461384
10.

Effort required to finish shotgun-generated genome sequences differs significantly among vertebrates.

Blakesley RW, Hansen NF, Gupta J, McDowell JC, Maskeri B, Barnabas BB, Brooks SY, Coleman H, Haghighi P, Ho SL, Schandler K, Stantripop S, Vogt JL, Thomas PJ; NISC Comparative Sequencing Program, Bouffard GG, Green ED.

BMC Genomics. 2010 Jan 11;11:21. doi: 10.1186/1471-2164-11-21.

11.

The relationship between synaptonemal complex length and genome size in four vertebrate classes (Osteicthyes, Reptilia, Aves, Mammalia).

Peterson DG, Stack SM, Healy JL, Donohoe BS, Anderson LK.

Chromosome Res. 1994 Mar;2(2):153-62.

PMID:
8032674
12.

Comparative genomics in vertebrate evolution and development.

Amemiya CT, Gomez-Chiarri M.

J Exp Zool A Comp Exp Biol. 2006 Sep 1;305(9):672-82. Review.

PMID:
16902957
13.

Phylogenomic investigation of CR1 LINE diversity in reptiles.

Shedlock AM.

Syst Biol. 2006 Dec;55(6):902-11.

PMID:
17345672
14.

Comparative analyses of multi-species sequences from targeted genomic regions.

Thomas JW, Touchman JW, Blakesley RW, Bouffard GG, Beckstrom-Sternberg SM, Margulies EH, Blanchette M, Siepel AC, Thomas PJ, McDowell JC, Maskeri B, Hansen NF, Schwartz MS, Weber RJ, Kent WJ, Karolchik D, Bruen TC, Bevan R, Cutler DJ, Schwartz S, Elnitski L, Idol JR, Prasad AB, Lee-Lin SQ, Maduro VV, Summers TJ, Portnoy ME, Dietrich NL, Akhter N, Ayele K, Benjamin B, Cariaga K, Brinkley CP, Brooks SY, Granite S, Guan X, Gupta J, Haghighi P, Ho SL, Huang MC, Karlins E, Laric PL, Legaspi R, Lim MJ, Maduro QL, Masiello CA, Mastrian SD, McCloskey JC, Pearson R, Stantripop S, Tiongson EE, Tran JT, Tsurgeon C, Vogt JL, Walker MA, Wetherby KD, Wiggins LS, Young AC, Zhang LH, Osoegawa K, Zhu B, Zhao B, Shu CL, De Jong PJ, Lawrence CE, Smit AF, Chakravarti A, Haussler D, Green P, Miller W, Green ED.

Nature. 2003 Aug 14;424(6950):788-93.

PMID:
12917688
15.

A novel Acetyl-CoA synthetase short-chain subfamily member 1 (Acss1) gene indicates a dynamic history of paralogue retention and loss in vertebrates.

Castro LF, Lopes-Marques M, Wilson JM, Rocha E, Reis-Henriques MA, Santos MM, Cunha I.

Gene. 2012 Apr 15;497(2):249-55. doi: 10.1016/j.gene.2012.01.013. Epub 2012 Jan 31.

PMID:
22313524
16.

[A comparative analysis of allozyme variability in vertebrate animals].

Mezhzherin SV.

Zh Obshch Biol. 1992 Jul-Aug;53(4):549-56. Russian.

PMID:
1523882
17.

Molecular evolution of the polyamine oxidase gene family in Metazoa.

Polticelli F, Salvi D, Mariottini P, Amendola R, Cervelli M.

BMC Evol Biol. 2012 Jun 20;12:90. doi: 10.1186/1471-2148-12-90.

18.

Differential loss and retention of cytoglobin, myoglobin, and globin-E during the radiation of vertebrates.

Hoffmann FG, Opazo JC, Storz JF.

Genome Biol Evol. 2011;3:588-600. doi: 10.1093/gbe/evr055. Epub 2011 Jun 21.

19.

Evolutionary growth process of highly conserved sequences in vertebrate genomes.

Ishibashi M, Noda AO, Sakate R, Imanishi T.

Gene. 2012 Aug 1;504(1):1-5. doi: 10.1016/j.gene.2012.05.003. Epub 2012 May 9.

PMID:
22580082
20.

Conserved regulatory modules in the Sox9 testis-specific enhancer predict roles for SOX, TCF/LEF, Forkhead, DMRT, and GATA proteins in vertebrate sex determination.

Bagheri-Fam S, Sinclair AH, Koopman P, Harley VR.

Int J Biochem Cell Biol. 2010 Mar;42(3):472-7. doi: 10.1016/j.biocel.2009.07.001. Epub 2009 Jul 16.

PMID:
19616114

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