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Items: 1 to 20 of 83

1.

Modifications of RNA polymerase II are pivotal in regulating gene expression states.

Brookes E, Pombo A.

EMBO Rep. 2009 Nov;10(11):1213-9. doi: 10.1038/embor.2009.221. Epub 2009 Oct 16. Review.

2.
3.

Polycomb associates genome-wide with a specific RNA polymerase II variant, and regulates metabolic genes in ESCs.

Brookes E, de Santiago I, Hebenstreit D, Morris KJ, Carroll T, Xie SQ, Stock JK, Heidemann M, Eick D, Nozaki N, Kimura H, Ragoussis J, Teichmann SA, Pombo A.

Cell Stem Cell. 2012 Feb 3;10(2):157-70. doi: 10.1016/j.stem.2011.12.017.

4.

Regulating RNA polymerase pausing and transcription elongation in embryonic stem cells.

Min IM, Waterfall JJ, Core LJ, Munroe RJ, Schimenti J, Lis JT.

Genes Dev. 2011 Apr 1;25(7):742-54. doi: 10.1101/gad.2005511.

5.

Repression of RNA polymerase II elongation in vivo is critically dependent on the C-terminus of Spt5.

Chen H, Contreras X, Yamaguchi Y, Handa H, Peterlin BM, Guo S.

PLoS One. 2009 Sep 9;4(9):e6918. doi: 10.1371/journal.pone.0006918.

6.

PAF1, a Molecular Regulator of Promoter-Proximal Pausing by RNA Polymerase II.

Chen FX, Woodfin AR, Gardini A, Rickels RA, Marshall SA, Smith ER, Shiekhattar R, Shilatifard A.

Cell. 2015 Aug 27;162(5):1003-15. doi: 10.1016/j.cell.2015.07.042. Epub 2015 Aug 13.

7.

Pdx-1 links histone H3-Lys-4 methylation to RNA polymerase II elongation during activation of insulin transcription.

Francis J, Chakrabarti SK, Garmey JC, Mirmira RG.

J Biol Chem. 2005 Oct 28;280(43):36244-53. Epub 2005 Sep 1.

8.

Ring1-mediated ubiquitination of H2A restrains poised RNA polymerase II at bivalent genes in mouse ES cells.

Stock JK, Giadrossi S, Casanova M, Brookes E, Vidal M, Koseki H, Brockdorff N, Fisher AG, Pombo A.

Nat Cell Biol. 2007 Dec;9(12):1428-35. Epub 2007 Nov 25.

PMID:
18037880
9.

Drosophila Pgc protein inhibits P-TEFb recruitment to chromatin in primordial germ cells.

Hanyu-Nakamura K, Sonobe-Nojima H, Tanigawa A, Lasko P, Nakamura A.

Nature. 2008 Feb 7;451(7179):730-3. doi: 10.1038/nature06498. Epub 2008 Jan 16.

10.
11.

NF-Y is essential for the recruitment of RNA polymerase II and inducible transcription of several CCAAT box-containing genes.

Kabe Y, Yamada J, Uga H, Yamaguchi Y, Wada T, Handa H.

Mol Cell Biol. 2005 Jan;25(1):512-22.

12.

Human negative elongation factor activates transcription and regulates alternative transcription initiation.

Sun J, Li R.

J Biol Chem. 2010 Feb 26;285(9):6443-52. doi: 10.1074/jbc.M109.084285. Epub 2009 Dec 22.

13.

ELL facilitates RNA polymerase II pause site entry and release.

Byun JS, Fufa TD, Wakano C, Fernandez A, Haggerty CM, Sung MH, Gardner K.

Nat Commun. 2012 Jan 17;3:633. doi: 10.1038/ncomms1652.

14.

Isw1 chromatin remodeling ATPase coordinates transcription elongation and termination by RNA polymerase II.

Morillon A, Karabetsou N, O'Sullivan J, Kent N, Proudfoot N, Mellor J.

Cell. 2003 Nov 14;115(4):425-35.

15.

The non-coding snRNA 7SK controls transcriptional termination, poising, and bidirectionality in embryonic stem cells.

Castelo-Branco G, Amaral PP, Engström PG, Robson SC, Marques SC, Bertone P, Kouzarides T.

Genome Biol. 2013;14(9):R98.

16.

Prediction of RNA Polymerase II recruitment, elongation and stalling from histone modification data.

Chen Y, Jørgensen M, Kolde R, Zhao X, Parker B, Valen E, Wen J, Sandelin A.

BMC Genomics. 2011 Nov 3;12:544. doi: 10.1186/1471-2164-12-544.

17.

Cdk9 is an essential kinase in Drosophila that is required for heat shock gene expression, histone methylation and elongation factor recruitment.

Eissenberg JC, Shilatifard A, Dorokhov N, Michener DE.

Mol Genet Genomics. 2007 Feb;277(2):101-14. Epub 2006 Sep 26.

PMID:
17001490
18.

Transcription factor Sp3 represses expression of p21CIP¹ via inhibition of productive elongation by RNA polymerase II.

Valin A, Ouyang J, Gill G.

Mol Cell Biol. 2013 Apr;33(8):1582-93. doi: 10.1128/MCB.00323-12. Epub 2013 Feb 11.

19.

Negative elongation factor-mediated suppression of RNA polymerase II elongation of Kaposi's sarcoma-associated herpesvirus lytic gene expression.

Toth Z, Brulois KF, Wong LY, Lee HR, Chung B, Jung JU.

J Virol. 2012 Sep;86(18):9696-707. doi: 10.1128/JVI.01012-12. Epub 2012 Jun 27.

20.

CBP-mediated acetylation of histone H3 lysine 27 antagonizes Drosophila Polycomb silencing.

Tie F, Banerjee R, Stratton CA, Prasad-Sinha J, Stepanik V, Zlobin A, Diaz MO, Scacheri PC, Harte PJ.

Development. 2009 Sep;136(18):3131-41. doi: 10.1242/dev.037127.

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