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Items: 1 to 20 of 141

1.

DNA-stable isotope probing integrated with metagenomics for retrieval of biphenyl dioxygenase genes from polychlorinated biphenyl-contaminated river sediment.

Sul WJ, Park J, Quensen JF 3rd, Rodrigues JL, Seliger L, Tsoi TV, Zylstra GJ, Tiedje JM.

Appl Environ Microbiol. 2009 Sep;75(17):5501-6. doi: 10.1128/AEM.00121-09.

2.

Biphenyl-metabolizing bacteria in the rhizosphere of horseradish and bulk soil contaminated by polychlorinated biphenyls as revealed by stable isotope probing.

Uhlik O, Jecna K, Mackova M, Vlcek C, Hroudova M, Demnerova K, Paces V, Macek T.

Appl Environ Microbiol. 2009 Oct;75(20):6471-7. doi: 10.1128/AEM.00466-09.

3.

Novel biphenyl-oxidizing bacteria and dioxygenase genes from a korean tidal mudflat.

Lee TK, Lee J, Sul WJ, Iwai S, Chai B, Tiedje JM, Park J.

Appl Environ Microbiol. 2011 Jun;77(11):3888-91. doi: 10.1128/AEM.00023-11.

4.

Biphenyl-utilizing bacteria and their functional genes in a pine root zone contaminated with polychlorinated biphenyls (PCBs).

Leigh MB, Pellizari VH, Uhlík O, Sutka R, Rodrigues J, Ostrom NE, Zhou J, Tiedje JM.

ISME J. 2007 Jun;1(2):134-48.

PMID:
18043623
5.

Diversity of chlorobiphenyl-metabolizing bacteria and their biphenyl dioxygenases in contaminated sediment.

Koubek J, Mackova M, Macek T, Uhlik O.

Chemosphere. 2013 Nov;93(8):1548-55. doi: 10.1016/j.chemosphere.2013.07.073.

PMID:
24007621
8.

Bacterial polycyclic aromatic hydrocarbon ring-hydroxylating dioxygenases in the sediments from the Pearl River estuary, China.

Wu P, Wang YS, Sun FL, Wu ML, Peng YL.

Appl Microbiol Biotechnol. 2014 Jan;98(2):875-84. doi: 10.1007/s00253-013-4854-5.

PMID:
23558584
9.

Molecular characterization of polychlorinated biphenyl-dechlorinating populations in contaminated sediments.

Oh KH, Ostrofsky EB, Cho YC.

J Microbiol. 2008 Apr;46(2):165-73. doi: 10.1007/s12275-007-0214-4.

PMID:
18545966
10.

Indigenous oil-degrading bacteria in crude oil-contaminated seawater of the Yellow sea, China.

Wang W, Zhang R, Shan D, Shao Z.

Appl Microbiol Biotechnol. 2014 Aug;98(16):7253-69. doi: 10.1007/s00253-014-5817-1. Erratum in: Appl Microbiol Biotechnol. 2014 Aug;98(16):7281. Zhong, Rongqiu [corrected to Zhang, Rongqiu].

PMID:
24866944
12.

Bacterial strains isolated from PCB-contaminated sediments and their use for bioaugmentation strategy in microcosms.

Dudášová H, Lukáčová L, Murínová S, Puškárová A, Pangallo D, Dercová K.

J Basic Microbiol. 2014 Apr;54(4):253-60. doi: 10.1002/jobm.201200369.

PMID:
23553615
13.
14.

Identification of novel methane-, ethane-, and propane-oxidizing bacteria at marine hydrocarbon seeps by stable isotope probing.

Redmond MC, Valentine DL, Sessions AL.

Appl Environ Microbiol. 2010 Oct;76(19):6412-22. doi: 10.1128/AEM.00271-10.

15.
16.

Characterization of two biphenyl dioxygenases for biphenyl/PCB degradation in A PCB degrader, Rhodococcus sp. strain RHA1.

Iwasaki T, Takeda H, Miyauchi K, Yamada T, Masai E, Fukuda M.

Biosci Biotechnol Biochem. 2007 Apr;71(4):993-1002.

17.

The effects of individual PCB congeners on the soil bacterial community structure and the abundance of biphenyl dioxygenase genes.

Correa PA, Lin L, Just CL, Hu D, Hornbuckle KC, Schnoor JL, Van Aken B.

Environ Int. 2010 Nov;36(8):901-6. doi: 10.1016/j.envint.2009.07.015.

18.

Terminal-restriction fragment length polymorphism analysis of biphenyl dioxygenase genes from a polychlorinated biphenyl-polluted soil.

Capodicasa S, Fedi S, Carnevali M, Caporali L, Viti C, Fava F, Zannoni D.

Res Microbiol. 2009 Dec;160(10):742-50. doi: 10.1016/j.resmic.2009.10.001.

PMID:
19835952
19.

Characterization of biphenyl dioxygenase sequences and activities encoded by the metagenomes of highly polychlorobiphenyl-contaminated soils.

Standfuss-Gabisch C, Al-Halbouni D, Hofer B.

Appl Environ Microbiol. 2012 Apr;78(8):2706-15. doi: 10.1128/AEM.07381-11.

20.

Active methylotrophs in the sediments of Lonar Lake, a saline and alkaline ecosystem formed by meteor impact.

Antony CP, Kumaresan D, Ferrando L, Boden R, Moussard H, Scavino AF, Shouche YS, Murrell JC.

ISME J. 2010 Nov;4(11):1470-80. doi: 10.1038/ismej.2010.70.

PMID:
20555363

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