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Items: 1 to 20 of 92

1.

A convergence of rRNA and mRNA quality control pathways revealed by mechanistic analysis of nonfunctional rRNA decay.

Cole SE, LaRiviere FJ, Merrikh CN, Moore MJ.

Mol Cell. 2009 May 14;34(4):440-50. doi: 10.1016/j.molcel.2009.04.017.

2.

Dom34:hbs1 plays a general role in quality-control systems by dissociation of a stalled ribosome at the 3' end of aberrant mRNA.

Tsuboi T, Kuroha K, Kudo K, Makino S, Inoue E, Kashima I, Inada T.

Mol Cell. 2012 May 25;46(4):518-29. doi: 10.1016/j.molcel.2012.03.013. Epub 2012 Apr 11.

3.

Dissection of Dom34-Hbs1 reveals independent functions in two RNA quality control pathways.

van den Elzen AM, Henri J, Lazar N, Gas ME, Durand D, Lacroute F, Nicaise M, van Tilbeurgh H, Séraphin B, Graille M.

Nat Struct Mol Biol. 2010 Dec;17(12):1446-52. doi: 10.1038/nsmb.1963. Epub 2010 Nov 21.

PMID:
21102444
4.

A late-acting quality control process for mature eukaryotic rRNAs.

LaRiviere FJ, Cole SE, Ferullo DJ, Moore MJ.

Mol Cell. 2006 Nov 17;24(4):619-26.

5.

Dom34:Hbs1 promotes subunit dissociation and peptidyl-tRNA drop-off to initiate no-go decay.

Shoemaker CJ, Eyler DE, Green R.

Science. 2010 Oct 15;330(6002):369-72. doi: 10.1126/science.1192430.

6.

Protein quality control systems associated with no-go and nonstop mRNA surveillance in yeast.

Matsuda R, Ikeuchi K, Nomura S, Inada T.

Genes Cells. 2014 Jan;19(1):1-12. doi: 10.1111/gtc.12106. Epub 2013 Nov 21.

7.

Immature large ribosomal subunits containing the 7S pre-rRNA can engage in translation in Saccharomyces cerevisiae.

Rodríguez-Galán O, García-Gómez JJ, Kressler D, de la Cruz J.

RNA Biol. 2015;12(8):838-46. doi: 10.1080/15476286.2015.1058477.

8.

ASC1 and RPS3: New actors in 18S non-functional rRNA decay.

Limoncelli KA, Merrikh CN, Moore MJ.

RNA. 2017 Sep 27. pii: rna.061671.117. doi: 10.1261/rna.061671.117. [Epub ahead of print]

PMID:
28956756
9.

40S subunit dissociation and proteasome-dependent RNA degradation in nonfunctional 25S rRNA decay.

Fujii K, Kitabatake M, Sakata T, Ohno M.

EMBO J. 2012 May 30;31(11):2579-89. doi: 10.1038/emboj.2012.85. Epub 2012 Apr 13.

10.

Chapter 12. Analysis of nonfunctional ribosomal RNA decay in Saccharomyces cerevisiae.

Cole SE, LaRiviere FJ.

Methods Enzymol. 2008;449:239-59. doi: 10.1016/S0076-6879(08)02412-9.

PMID:
19215762
11.

A role for ubiquitin in the clearance of nonfunctional rRNAs.

Fujii K, Kitabatake M, Sakata T, Miyata A, Ohno M.

Genes Dev. 2009 Apr 15;23(8):963-74. doi: 10.1101/gad.1775609.

12.

Structure of the no-go mRNA decay complex Dom34-Hbs1 bound to a stalled 80S ribosome.

Becker T, Armache JP, Jarasch A, Anger AM, Villa E, Sieber H, Motaal BA, Mielke T, Berninghausen O, Beckmann R.

Nat Struct Mol Biol. 2011 Jun;18(6):715-20. doi: 10.1038/nsmb.2057. Epub 2011 May 29.

PMID:
21623367
13.

Quality control systems for aberrant mRNAs induced by aberrant translation elongation and termination.

Inada T.

Biochim Biophys Acta. 2013 Jun-Jul;1829(6-7):634-42. doi: 10.1016/j.bbagrm.2013.02.004. Epub 2013 Feb 14. Review.

PMID:
23416749
14.

Polyadenylation of rRNA in Saccharomyces cerevisiae.

Kuai L, Fang F, Butler JS, Sherman F.

Proc Natl Acad Sci U S A. 2004 Jun 8;101(23):8581-6. Epub 2004 Jun 1.

15.

Related mechanisms for mRNA and rRNA quality control.

Swisher KD, Parker R.

Mol Cell. 2009 May 14;34(4):401-2. doi: 10.1016/j.molcel.2009.05.008.

16.

Crt10 directs the cullin-E3 ligase Rtt101 to nonfunctional 25S rRNA decay.

Sakata T, Fujii K, Ohno M, Kitabatake M.

Biochem Biophys Res Commun. 2015 Jan 30;457(1):90-4. doi: 10.1016/j.bbrc.2014.12.072. Epub 2014 Dec 19.

PMID:
25534857
17.

Initiation-mediated mRNA decay in yeast affects heat-shock mRNAs, and works through decapping and 5'-to-3' hydrolysis.

Heikkinen HL, Llewellyn SA, Barnes CA.

Nucleic Acids Res. 2003 Jul 15;31(14):4006-16.

18.

Surveillance pathways rescuing eukaryotic ribosomes lost in translation.

Graille M, Séraphin B.

Nat Rev Mol Cell Biol. 2012 Nov;13(11):727-35. doi: 10.1038/nrm3457. Epub 2012 Oct 17. Review.

PMID:
23072885
19.

Chapter 1. Methods to study no-go mRNA decay in Saccharomyces cerevisiae.

Doma MK.

Methods Enzymol. 2008;449:3-21. doi: 10.1016/S0076-6879(08)02401-4.

PMID:
19215751
20.

Structure of yeast Dom34: a protein related to translation termination factor Erf1 and involved in No-Go decay.

Graille M, Chaillet M, van Tilbeurgh H.

J Biol Chem. 2008 Mar 14;283(11):7145-54. doi: 10.1074/jbc.M708224200. Epub 2008 Jan 7.

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