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Items: 1 to 20 of 234

1.

Y-Family DNA polymerases may use two different dNTP shapes for insertion: a hypothesis and its implications.

Chandani S, Loechler EL.

J Mol Graph Model. 2009 Apr;27(7):759-69. doi: 10.1016/j.jmgm.2008.11.003.

2.

How Y-Family DNA polymerase IV is more accurate than Dpo4 at dCTP insertion opposite an N2-dG adduct of benzo[a]pyrene.

Sholder G, Creech A, Loechler EL.

DNA Repair (Amst). 2015 Nov;35:144-53. doi: 10.1016/j.dnarep.2015.09.020.

PMID:
26523515
3.
5.

Amino acid architecture that influences dNTP insertion efficiency in Y-family DNA polymerase V of E. coli.

Seo KY, Yin J, Donthamsetti P, Chandani S, Lee CH, Loechler EL.

J Mol Biol. 2009 Sep 18;392(2):270-82. doi: 10.1016/j.jmb.2009.07.016.

6.

Mirror image stereoisomers of the major benzo[a]pyrene N2-dG adduct are bypassed by different lesion-bypass DNA polymerases in E. coli.

Seo KY, Nagalingam A, Miri S, Yin J, Chandani S, Kolbanovskiy A, Shastry A, Loechler EL.

DNA Repair (Amst). 2006 Apr 8;5(4):515-22.

PMID:
16483853
8.
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11.

Architecture of y-family DNA polymerases relevant to translesion DNA synthesis as revealed in structural and molecular modeling studies.

Chandani S, Jacobs C, Loechler EL.

J Nucleic Acids. 2010 Sep 16;2010. pii: 784081. doi: 10.4061/2010/784081.

13.
14.

A structural gap in Dpo4 supports mutagenic bypass of a major benzo[a]pyrene dG adduct in DNA through template misalignment.

Bauer J, Xing G, Yagi H, Sayer JM, Jerina DM, Ling H.

Proc Natl Acad Sci U S A. 2007 Sep 18;104(38):14905-10. Erratum in: Proc Natl Acad Sci U S A. 2007 Oct 23;104(43):17240.

15.

The N-clasp of human DNA polymerase kappa promotes blockage or error-free bypass of adenine- or guanine-benzo[a]pyrenyl lesions.

Jia L, Geacintov NE, Broyde S.

Nucleic Acids Res. 2008 Nov;36(20):6571-84. doi: 10.1093/nar/gkn719.

17.

Nucleotide selectivity opposite a benzo[a]pyrene-derived N2-dG adduct in a Y-family DNA polymerase: a 5'-slippage mechanism.

Xu P, Oum L, Geacintov NE, Broyde S.

Biochemistry. 2008 Mar 4;47(9):2701-9. doi: 10.1021/bi701839q.

PMID:
18260644
20.

Human DNA polymerases catalyze lesion bypass across benzo[a]pyrene-derived DNA adduct clustered with an abasic site.

Starostenko LV, Rechkunova NI, Lebedeva NA, Kolbanovskiy A, Geacintov NE, Lavrik OI.

DNA Repair (Amst). 2014 Dec;24:1-9.

PMID:
25460917

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