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Items: 1 to 20 of 321

1.

A fast, robust and tunable synthetic gene oscillator.

Stricker J, Cookson S, Bennett MR, Mather WH, Tsimring LS, Hasty J.

Nature. 2008 Nov 27;456(7221):516-9. doi: 10.1038/nature07389. Epub 2008 Oct 29.

PMID:
18971928
2.

Synchronous long-term oscillations in a synthetic gene circuit.

Potvin-Trottier L, Lord ND, Vinnicombe G, Paulsson J.

Nature. 2016 Oct 27;538(7626):514-517. doi: 10.1038/nature19841. Epub 2016 Oct 12.

PMID:
27732583
3.

A synchronized quorum of genetic clocks.

Danino T, Mondragón-Palomino O, Tsimring L, Hasty J.

Nature. 2010 Jan 21;463(7279):326-30. doi: 10.1038/nature08753.

4.

Sources of Variability in a Synthetic Gene Oscillator.

Veliz-Cuba A, Hirning AJ, Atanas AA, Hussain F, Vancia F, Josić K, Bennett MR.

PLoS Comput Biol. 2015 Dec 22;11(12):e1004674. doi: 10.1371/journal.pcbi.1004674. eCollection 2015 Dec 22.

5.

Oscillations by minimal bacterial suicide circuits reveal hidden facets of host-circuit physiology.

Marguet P, Tanouchi Y, Spitz E, Smith C, You L.

PLoS One. 2010 Jul 30;5(7):e11909. doi: 10.1371/journal.pone.0011909.

6.

Engineered temperature compensation in a synthetic genetic clock.

Hussain F, Gupta C, Hirning AJ, Ott W, Matthews KS, Josic K, Bennett MR.

Proc Natl Acad Sci U S A. 2014 Jan 21;111(3):972-7. doi: 10.1073/pnas.1316298111. Epub 2014 Jan 6.

7.

Slow activator degradation reduces the robustness of a coupled feedback loop oscillator.

Sayut DJ, Sun L.

Mol Biosyst. 2010 Aug;6(8):1469-74. doi: 10.1039/c003480k. Epub 2010 May 27.

PMID:
20505881
8.

Considerations for using integral feedback control to construct a perfectly adapting synthetic gene network.

Ang J, Bagh S, Ingalls BP, McMillen DR.

J Theor Biol. 2010 Oct 21;266(4):723-38. doi: 10.1016/j.jtbi.2010.07.034. Epub 2010 Aug 3.

PMID:
20688080
9.

Building biological memory by linking positive feedback loops.

Chang DE, Leung S, Atkinson MR, Reifler A, Forger D, Ninfa AJ.

Proc Natl Acad Sci U S A. 2010 Jan 5;107(1):175-80. doi: 10.1073/pnas.0908314107. Epub 2009 Dec 14.

10.

Synthetic in vitro transcriptional oscillators.

Kim J, Winfree E.

Mol Syst Biol. 2011 Feb 1;7:465. doi: 10.1038/msb.2010.119.

11.

Designer gene networks: Towards fundamental cellular control.

Hasty J, Isaacs F, Dolnik M, McMillen D, Collins JJ.

Chaos. 2001 Mar;11(1):207-220.

PMID:
12779454
12.

A tunable synthetic mammalian oscillator.

Tigges M, Marquez-Lago TT, Stelling J, Fussenegger M.

Nature. 2009 Jan 15;457(7227):309-12. doi: 10.1038/nature07616.

PMID:
19148099
13.

Avoiding transcription factor competition at promoter level increases the chances of obtaining oscillation.

Munteanu A, Constante M, Isalan M, Solé RV.

BMC Syst Biol. 2010 May 17;4:66. doi: 10.1186/1752-0509-4-66.

14.

Construction of an Oscillator Gene Circuit by Negative and Positive Feedbacks.

Shen S, Ma Y, Ren Y, Wei D.

J Microbiol Biotechnol. 2016 Jan;26(1):139-44. doi: 10.4014/jmb.1507.07019.

15.

Interlinking positive and negative feedback loops creates a tunable motif in gene regulatory networks.

Tian XJ, Zhang XP, Liu F, Wang W.

Phys Rev E Stat Nonlin Soft Matter Phys. 2009 Jul;80(1 Pt 1):011926. Epub 2009 Jul 31.

PMID:
19658748
16.

A computational model of gene expression in an inducible synthetic circuit.

Ceroni F, Furini S, Cavalcanti S.

Pac Symp Biocomput. 2010:409-20.

17.

Robust model matching design methodology for a stochastic synthetic gene network.

Chen BS, Chang CH, Wang YC, Wu CH, Lee HC.

Math Biosci. 2011 Mar;230(1):23-36. doi: 10.1016/j.mbs.2010.12.007. Epub 2011 Jan 6.

PMID:
21215760
18.

Predicting synthetic gene networks.

di Bernardo D, Marucci L, Menolascina F, Siciliano V.

Methods Mol Biol. 2012;813:57-81. doi: 10.1007/978-1-61779-412-4_4.

PMID:
22083736
19.

Foundations for the design and implementation of synthetic genetic circuits.

Slusarczyk AL, Lin A, Weiss R.

Nat Rev Genet. 2012 May 18;13(6):406-20. doi: 10.1038/nrg3227. Review.

PMID:
22596318
20.

Refined method for the genomic integration of complex synthetic circuits.

Ying BW, Ito Y, Shimizu Y, Yomo T.

J Biosci Bioeng. 2010 Nov;110(5):529-36. doi: 10.1016/j.jbiosc.2010.05.014. Epub 2010 Jun 20.

PMID:
20646959

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