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Items: 1 to 20 of 829

1.
2.

Potent effect of target structure on microRNA function.

Long D, Lee R, Williams P, Chan CY, Ambros V, Ding Y.

Nat Struct Mol Biol. 2007 Apr;14(4):287-94. Epub 2007 Apr 1.

PMID:
17401373
3.

Computational analysis of microRNA targets in Caenorhabditis elegans.

Watanabe Y, Yachie N, Numata K, Saito R, Kanai A, Tomita M.

Gene. 2006 Jan 3;365:2-10. Epub 2005 Dec 13.

PMID:
16356665
4.

Prediction of microRNA targets in Caenorhabditis elegans using a self-organizing map.

Heikkinen L, Kolehmainen M, Wong G.

Bioinformatics. 2011 May 1;27(9):1247-54. doi: 10.1093/bioinformatics/btr144. Epub 2011 Mar 21.

PMID:
21422073
5.

The role of site accessibility in microRNA target recognition.

Kertesz M, Iovino N, Unnerstall U, Gaul U, Segal E.

Nat Genet. 2007 Oct;39(10):1278-84. Epub 2007 Sep 23.

PMID:
17893677
6.

Fast and effective prediction of microRNA/target duplexes.

Rehmsmeier M, Steffen P, Hochsmann M, Giegerich R.

RNA. 2004 Oct;10(10):1507-17.

7.

MicroRNA binding sites in C. elegans 3' UTRs.

Liu C, Rennie WA, Mallick B, Kanoria S, Long D, Wolenc A, Carmack CS, Ding Y.

RNA Biol. 2014;11(6):693-701. Epub 2014 Apr 25.

8.

miRNA_Targets: a database for miRNA target predictions in coding and non-coding regions of mRNAs.

Kumar A, Wong AK, Tizard ML, Moore RJ, Lefèvre C.

Genomics. 2012 Dec;100(6):352-6. doi: 10.1016/j.ygeno.2012.08.006. Epub 2012 Aug 25.

9.

Comparing sequence and expression for predicting microRNA targets using GenMiR3.

Huang JC, Frey BJ, Morris QD.

Pac Symp Biocomput. 2008:52-63.

10.

MiRTif: a support vector machine-based microRNA target interaction filter.

Yang Y, Wang YP, Li KB.

BMC Bioinformatics. 2008 Dec 12;9 Suppl 12:S4. doi: 10.1186/1471-2105-9-S12-S4.

11.

Solution structure of miRNA:mRNA complex.

Cevec M, Plavec J.

Methods Mol Biol. 2010;667:251-65. doi: 10.1007/978-1-60761-811-9_17.

PMID:
20827539
12.

Positive and negative modulation of viral and cellular mRNAs by liver-specific microRNA miR-122.

Jopling CL, Norman KL, Sarnow P.

Cold Spring Harb Symp Quant Biol. 2006;71:369-76. Review.

PMID:
17381319
13.

A genome-wide map of conserved microRNA targets in C. elegans.

Lall S, Grün D, Krek A, Chen K, Wang YL, Dewey CN, Sood P, Colombo T, Bray N, Macmenamin P, Kao HL, Gunsalus KC, Pachter L, Piano F, Rajewsky N.

Curr Biol. 2006 Mar 7;16(5):460-71. Epub 2006 Feb 2.

14.

CLIP-based prediction of mammalian microRNA binding sites.

Liu C, Mallick B, Long D, Rennie WA, Wolenc A, Carmack CS, Ding Y.

Nucleic Acids Res. 2013 Aug;41(14):e138. doi: 10.1093/nar/gkt435. Epub 2013 May 22.

15.

Repression of C. elegans microRNA targets at the initiation level of translation requires GW182 proteins.

Ding XC, Grosshans H.

EMBO J. 2009 Feb 4;28(3):213-22. doi: 10.1038/emboj.2008.275. Epub 2009 Jan 8.

16.

STarMir: a web server for prediction of microRNA binding sites.

Rennie W, Liu C, Carmack CS, Wolenc A, Kanoria S, Lu J, Long D, Ding Y.

Nucleic Acids Res. 2014 Jul;42(Web Server issue):W114-8. doi: 10.1093/nar/gku376. Epub 2014 May 6.

17.

Functional genomic, computational and proteomic analysis of C. elegans microRNAs.

Lehrbach NJ, Miska EA.

Brief Funct Genomic Proteomic. 2008 May;7(3):228-35. doi: 10.1093/bfgp/eln024. Epub 2008 Jun 19. Review.

PMID:
18565984
18.

Computational prediction and experimental validation of evolutionarily conserved microRNA target genes in bilaterian animals.

Takane K, Fujishima K, Watanabe Y, Sato A, Saito N, Tomita M, Kanai A.

BMC Genomics. 2010 Feb 9;11:101. doi: 10.1186/1471-2164-11-101.

19.

Prediction of human microRNA targets.

John B, Sander C, Marks DS.

Methods Mol Biol. 2006;342:101-13. Review.

PMID:
16957370
20.

An extensive class of small RNAs in Caenorhabditis elegans.

Lee RC, Ambros V.

Science. 2001 Oct 26;294(5543):862-4.

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