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Items: 1 to 20 of 107

1.

An overview of image-processing methods for Affymetrix GeneChips.

Arteaga-Salas JM, Zuzan H, Langdon WB, Upton GJ, Harrison AP.

Brief Bioinform. 2008 Jan;9(1):25-33. Epub 2007 Dec 5. Review.

PMID:
18057073
2.

Microarray blob-defect removal improves array analysis.

Song JS, Maghsoudi K, Li W, Fox E, Quackenbush J, Shirley Liu X.

Bioinformatics. 2007 Apr 15;23(8):966-71. Epub 2007 Mar 1.

PMID:
17332024
3.
4.

Improving gene quantification by adjustable spot-image restoration.

Daskalakis A, Cavouras D, Bougioukos P, Kostopoulos S, Glotsos D, Kalatzis I, Kagadis GC, Argyropoulos C, Nikiforidis G.

Bioinformatics. 2007 Sep 1;23(17):2265-72. Epub 2007 Jun 28.

PMID:
17599935
5.

MAnGO: an interactive R-based tool for two-colour microarray analysis.

Marisa L, Ichanté JL, Reymond N, Aggerbeck L, Delacroix H, Mucchielli-Giorgi MH.

Bioinformatics. 2007 Sep 1;23(17):2339-41. Epub 2007 Jun 22.

PMID:
17586547
6.

Microarray image compression using a variation of singular value decomposition.

Peters TJ, Smolíková-Wachowiak R, Wachowiak MP.

Conf Proc IEEE Eng Med Biol Soc. 2007;2007:1176-9.

PMID:
18002172
7.

Multichannel segmentation of cDNA microarray images using the Bayes classifier.

Giannakeas N, Fotiadis DI.

Conf Proc IEEE Eng Med Biol Soc. 2007;2007:3466-9.

PMID:
18002743
8.

Microarray image processing: current status and future directions.

Istepanian RS.

IEEE Trans Nanobioscience. 2003 Dec;2(4):173-5. No abstract available.

PMID:
15376905
9.

Donuts, scratches and blanks: robust model-based segmentation of microarray images.

Li Q, Fraley C, Bumgarner RE, Yeung KY, Raftery AE.

Bioinformatics. 2005 Jun 15;21(12):2875-82. Epub 2005 Apr 21.

PMID:
15845656
10.

Copasetic analysis: a framework for the blind analysis of microarray imagery.

Fraser K, O'Neill P, Wang Z, Liu X.

Syst Biol (Stevenage). 2004 Jun;1(1):190-6.

PMID:
17052129
11.

Correcting for gene-specific dye bias in DNA microarrays using the method of maximum likelihood.

Kelley R, Feizi H, Ideker T.

Bioinformatics. 2008 Jan 1;24(1):71-7. Epub 2007 Jul 10.

12.

Expression ratio evaluation in two-colour microarray experiments is significantly improved by correcting image misalignment.

Tang T, François N, Glatigny A, Agier N, Mucchielli MH, Aggerbeck L, Delacroix H.

Bioinformatics. 2007 Oct 15;23(20):2686-91. Epub 2007 Aug 12.

PMID:
17698492
13.

Segmentation of cDNA microarray spots using markov random field modeling.

Demirkaya O, Asyali MH, Shoukri MM.

Bioinformatics. 2005 Jul 1;21(13):2994-3000. Epub 2005 Apr 19.

PMID:
15840703
14.

A comparison of background correction methods for two-colour microarrays.

Ritchie ME, Silver J, Oshlack A, Holmes M, Diyagama D, Holloway A, Smyth GK.

Bioinformatics. 2007 Oct 15;23(20):2700-7. Epub 2007 Aug 25.

PMID:
17720982
15.

A novel approach for high-quality microarray processing using third-dye array visualization technology.

Wang X, Jiang N, Feng X, Xie Y, Tonellato PJ, Ghosh S, Hessner MJ.

IEEE Trans Nanobioscience. 2003 Dec;2(4):193-201.

PMID:
15376909
16.

Background correction for cDNA microarray images using the TV+L1 model.

Yin W, Chen T, Zhou SX, Chakraborty A.

Bioinformatics. 2005 May 15;21(10):2410-6. Epub 2005 Feb 22.

PMID:
15728112
17.

Automated Microarray Image Analysis Toolbox for MATLAB.

White AM, Daly DS, Willse AR, Protic M, Chandler DP.

Bioinformatics. 2005 Sep 1;21(17):3578-9. Epub 2005 Jul 26.

PMID:
16046497
18.

Application of wavelet modulus maxima in microarray spots recognition.

Wang XH, Istepanian RS, Song YH.

IEEE Trans Nanobioscience. 2003 Dec;2(4):190-2.

PMID:
15376908
19.

Improved processing of microarray data using image reconstruction techniques.

O'Neill P, Magoulas GD, Liu X.

IEEE Trans Nanobioscience. 2003 Dec;2(4):176-83.

PMID:
15376906
20.

Clustering-based spot segmentation of cDNA microarray images.

Uslan V, Bucak IÖ.

Conf Proc IEEE Eng Med Biol Soc. 2010;2010:1828-31. doi: 10.1109/IEMBS.2010.5626430.

PMID:
21096143

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