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Items: 1 to 20 of 186

1.

Bacterial flora-typing with targeted, chip-based Pyrosequencing.

Sundquist A, Bigdeli S, Jalili R, Druzin ML, Waller S, Pullen KM, El-Sayed YY, Taslimi MM, Batzoglou S, Ronaghi M.

BMC Microbiol. 2007 Nov 30;7:108.

2.

Metagenomics: read length matters.

Wommack KE, Bhavsar J, Ravel J.

Appl Environ Microbiol. 2008 Mar;74(5):1453-63. doi: 10.1128/AEM.02181-07. Epub 2008 Jan 11.

3.

Comparative analysis of human saliva microbiome diversity by barcoded pyrosequencing and cloning approaches.

Nasidze I, Quinque D, Li J, Li M, Tang K, Stoneking M.

Anal Biochem. 2009 Aug 1;391(1):64-8. doi: 10.1016/j.ab.2009.04.034. Epub 2009 May 3.

PMID:
19406095
4.

The All-Species Living Tree project: a 16S rRNA-based phylogenetic tree of all sequenced type strains.

Yarza P, Richter M, Peplies J, Euzeby J, Amann R, Schleifer KH, Ludwig W, Glöckner FO, Rosselló-Móra R.

Syst Appl Microbiol. 2008 Sep;31(4):241-50. doi: 10.1016/j.syapm.2008.07.001. Epub 2008 Aug 9.

PMID:
18692976
5.

Bacterial tag-encoded FLX amplicon pyrosequencing (bTEFAP) for microbiome studies: bacterial diversity in the ileum of newly weaned Salmonella-infected pigs.

Dowd SE, Sun Y, Wolcott RD, Domingo A, Carroll JA.

Foodborne Pathog Dis. 2008 Aug;5(4):459-72. doi: 10.1089/fpd.2008.0107.

PMID:
18713063
6.

Pyrosequencing: nucleotide sequencing technology with bacterial genotyping applications.

Clarke SC.

Expert Rev Mol Diagn. 2005 Nov;5(6):947-53. Review.

PMID:
16255635
7.

Coamplification of eukaryotic DNA with 16S rRNA gene-based PCR primers: possible consequences for population fingerprinting of complex microbial communities.

Huys G, Vanhoutte T, Joossens M, Mahious AS, De Brandt E, Vermeire S, Swings J.

Curr Microbiol. 2008 Jun;56(6):553-7. doi: 10.1007/s00284-008-9122-z. Epub 2008 Feb 27.

PMID:
18301945
8.

Then and now: use of 16S rDNA gene sequencing for bacterial identification and discovery of novel bacteria in clinical microbiology laboratories.

Woo PC, Lau SK, Teng JL, Tse H, Yuen KY.

Clin Microbiol Infect. 2008 Oct;14(10):908-34. doi: 10.1111/j.1469-0691.2008.02070.x. Review.

9.
10.

Novel microarray design strategy to study complex bacterial communities.

Huyghe A, Francois P, Charbonnier Y, Tangomo-Bento M, Bonetti EJ, Paster BJ, Bolivar I, Baratti-Mayer D, Pittet D, Schrenzel J; Geneva Study Group on Noma (GESNOMA).

Appl Environ Microbiol. 2008 Mar;74(6):1876-85. doi: 10.1128/AEM.01722-07. Epub 2008 Jan 18.

11.

Selection of primers for optimal taxonomic classification of environmental 16S rRNA gene sequences.

Soergel DA, Dey N, Knight R, Brenner SE.

ISME J. 2012 Jul;6(7):1440-4. doi: 10.1038/ismej.2011.208. Epub 2012 Jan 12.

12.
13.

Phenotypic and genotypic analyses of clinical Fusobacterium nucleatum and Fusobacterium periodonticum isolates from the human gut.

Strauss J, White A, Ambrose C, McDonald J, Allen-Vercoe E.

Anaerobe. 2008 Dec;14(6):301-9. doi: 10.1016/j.anaerobe.2008.12.003. Epub 2008 Dec 16.

PMID:
19114111
14.
15.

A multilocus phylogeny of the Streptomyces griseus 16S rRNA gene clade: use of multilocus sequence analysis for streptomycete systematics.

Guo Y, Zheng W, Rong X, Huang Y.

Int J Syst Evol Microbiol. 2008 Jan;58(Pt 1):149-59. doi: 10.1099/ijs.0.65224-0.

PMID:
18175701
16.

Development of a 16S rRNA gene-based prototype microarray for the detection of selected actinomycetes genera.

Kyselková M, Kopecký J, Felföldi T, Cermák L, Omelka M, Grundmann GL, Moënne-Loccoz Y, Ságová-Marecková M.

Antonie Van Leeuwenhoek. 2008 Oct;94(3):439-53. doi: 10.1007/s10482-008-9261-z. Epub 2008 Jul 4.

PMID:
18600470
17.

Turkey fecal microbial community structure and functional gene diversity revealed by 16S rRNA gene and metagenomic sequences.

Lu J, Domingo JS.

J Microbiol. 2008 Oct;46(5):469-77. doi: 10.1007/s12275-008-0117-z. Epub 2008 Oct 31.

PMID:
18974945
18.

[16S rRNA gene sequencing for pathogen identification from clinical specimens].

Lu XX, Wu W, Wang M, Huang YF.

Zhonghua Yi Xue Za Zhi. 2008 Jan 8;88(2):123-6. Chinese.

PMID:
18353221
19.

PCR and real-time PCR primers developed for detection and identification of Bifidobacterium thermophilum in faeces.

Mathys S, Lacroix C, Mini R, Meile L.

BMC Microbiol. 2008 Oct 10;8:179. doi: 10.1186/1471-2180-8-179.

20.

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