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Items: 1 to 20 of 160


Evolution, biogenesis, expression, and target predictions of a substantially expanded set of Drosophila microRNAs.

Ruby JG, Stark A, Johnston WK, Kellis M, Bartel DP, Lai EC.

Genome Res. 2007 Dec;17(12):1850-64.


Computational identification of Drosophila microRNA genes.

Lai EC, Tomancak P, Williams RW, Rubin GM.

Genome Biol. 2003;4(7):R42.


Identification of Drosophila MicroRNA targets.

Stark A, Brennecke J, Russell RB, Cohen SM.

PLoS Biol. 2003 Dec;1(3):E60.


Identification of novel Drosophila melanogaster microRNAs.

Sandmann T, Cohen SM.

PLoS One. 2007 Nov 28;2(11):e1265.


Systematic discovery and characterization of fly microRNAs using 12 Drosophila genomes.

Stark A, Kheradpour P, Parts L, Brennecke J, Hodges E, Hannon GJ, Kellis M.

Genome Res. 2007 Dec;17(12):1865-79.


Conservation and divergence of microRNAs in Populus.

Barakat A, Wall PK, Diloreto S, Depamphilis CW, Carlson JE.

BMC Genomics. 2007 Dec 31;8:481. doi: 10.1186/1471-2164-8-481.


Deep sequencing of small RNA libraries reveals dynamic regulation of conserved and novel microRNAs and microRNA-stars during silkworm development.

Jagadeeswaran G, Zheng Y, Sumathipala N, Jiang H, Arrese EL, Soulages JL, Zhang W, Sunkar R.

BMC Genomics. 2010 Jan 20;11:52. doi: 10.1186/1471-2164-11-52.


MicroRNA evolution by arm switching.

Griffiths-Jones S, Hui JH, Marco A, Ronshaugen M.

EMBO Rep. 2011 Feb;12(2):172-7. doi: 10.1038/embor.2010.191.


MicroRNA targets in Drosophila.

Enright AJ, John B, Gaul U, Tuschl T, Sander C, Marks DS.

Genome Biol. 2003;5(1):R1.


Identification and characteristics of microRNAs from Bombyx mori.

He PA, Nie Z, Chen J, Chen J, Lv Z, Sheng Q, Zhou S, Gao X, Kong L, Wu X, Jin Y, Zhang Y.

BMC Genomics. 2008 May 28;9:248. doi: 10.1186/1471-2164-9-248.


Functional shifts in insect microRNA evolution.

Marco A, Hui JH, Ronshaugen M, Griffiths-Jones S.

Genome Biol Evol. 2010;2:686-96. doi: 10.1093/gbe/evq053.


Deep annotation of Drosophila melanogaster microRNAs yields insights into their processing, modification, and emergence.

Berezikov E, Robine N, Samsonova A, Westholm JO, Naqvi A, Hung JH, Okamura K, Dai Q, Bortolamiol-Becet D, Martin R, Zhao Y, Zamore PD, Hannon GJ, Marra MA, Weng Z, Perrimon N, Lai EC.

Genome Res. 2011 Feb;21(2):203-15. doi: 10.1101/gr.116657.110.


Identification of novel microRNAs in Hevea brasiliensis and computational prediction of their targets.

Gébelin V, Argout X, Engchuan W, Pitollat B, Duan C, Montoro P, Leclercq J.

BMC Plant Biol. 2012 Feb 13;12:18. doi: 10.1186/1471-2229-12-18.


Computational prediction and experimental validation of evolutionarily conserved microRNA target genes in bilaterian animals.

Takane K, Fujishima K, Watanabe Y, Sato A, Saito N, Tomita M, Kanai A.

BMC Genomics. 2010 Feb 9;11:101. doi: 10.1186/1471-2164-11-101.


Identifications of conserved 7-mers in 3'-UTRs and microRNAs in Drosophila.

Gu J, Fu H, Zhang X, Li Y.

BMC Bioinformatics. 2007 Nov 8;8:432.


The impact of age, biogenesis, and genomic clustering on Drosophila microRNA evolution.

Mohammed J, Flynt AS, Siepel A, Lai EC.

RNA. 2013 Sep;19(9):1295-308. doi: 10.1261/rna.039248.113.


Evolutionary conserved microRNAs are ubiquitously expressed compared to tick-specific miRNAs in the cattle tick Rhipicephalus (Boophilus) microplus.

Barrero RA, Keeble-Gagnère G, Zhang B, Moolhuijzen P, Ikeo K, Tateno Y, Gojobori T, Guerrero FD, Lew-Tabor A, Bellgard M.

BMC Genomics. 2011 Jun 24;12:328. doi: 10.1186/1471-2164-12-328.


Functionally distinct regulatory RNAs generated by bidirectional transcription and processing of microRNA loci.

Tyler DM, Okamura K, Chung WJ, Hagen JW, Berezikov E, Hannon GJ, Lai EC.

Genes Dev. 2008 Jan 1;22(1):26-36. doi: 10.1101/gad.1615208.

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