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Items: 1 to 20 of 115


MutDB: update on development of tools for the biochemical analysis of genetic variation.

Singh A, Olowoyeye A, Baenziger PH, Dantzer J, Kann MG, Radivojac P, Heiland R, Mooney SD.

Nucleic Acids Res. 2008 Jan;36(Database issue):D815-9. Epub 2007 Sep 7.


MutDB services: interactive structural analysis of mutation data.

Dantzer J, Moad C, Heiland R, Mooney S.

Nucleic Acids Res. 2005 Jul 1;33(Web Server issue):W311-4.


MutDB: annotating human variation with functionally relevant data.

Mooney SD, Altman RB.

Bioinformatics. 2003 Sep 22;19(14):1858-60.


An integrated database-pipeline system for studying single nucleotide polymorphisms and diseases.

Yang JO, Hwang S, Oh J, Bhak J, Sohn TK.

BMC Bioinformatics. 2008 Dec 12;9 Suppl 12:S19. doi: 10.1186/1471-2105-9-S12-S19.


LS-SNP: large-scale annotation of coding non-synonymous SNPs based on multiple information sources.

Karchin R, Diekhans M, Kelly L, Thomas DJ, Pieper U, Eswar N, Haussler D, Sali A.

Bioinformatics. 2005 Jun 15;21(12):2814-20. Epub 2005 Apr 12.


Snat: a SNP annotation tool for bovine by integrating various sources of genomic information.

Jiang J, Jiang L, Zhou B, Fu W, Liu JF, Zhang Q.

BMC Genet. 2011 Oct 7;12:85. doi: 10.1186/1471-2156-12-85.


Joint annotation of coding and non-coding single nucleotide polymorphisms and mutations in the SNPeffect and PupaSuite databases.

Reumers J, Conde L, Medina I, Maurer-Stroh S, Van Durme J, Dopazo J, Rousseau F, Schymkowitz J.

Nucleic Acids Res. 2008 Jan;36(Database issue):D825-9. Epub 2007 Dec 17.


F-SNP: computationally predicted functional SNPs for disease association studies.

Lee PH, Shatkay H.

Nucleic Acids Res. 2008 Jan;36(Database issue):D820-4. Epub 2007 Nov 5.


pfSNP: An integrated potentially functional SNP resource that facilitates hypotheses generation through knowledge syntheses.

Wang J, Ronaghi M, Chong SS, Lee CG.

Hum Mutat. 2011 Jan;32(1):19-24. doi: 10.1002/humu.21331.


LS-SNP/PDB: annotated non-synonymous SNPs mapped to Protein Data Bank structures.

Ryan M, Diekhans M, Lien S, Liu Y, Karchin R.

Bioinformatics. 2009 Jun 1;25(11):1431-2. doi: 10.1093/bioinformatics/btp242. Epub 2009 Apr 15.


Structure SNP (StSNP): a web server for mapping and modeling nsSNPs on protein structures with linkage to metabolic pathways.

Uzun A, Leslin CM, Abyzov A, Ilyin V.

Nucleic Acids Res. 2007 Jul;35(Web Server issue):W384-92. Epub 2007 May 30.


Human non-synonymous SNPs: server and survey.

Ramensky V, Bork P, Sunyaev S.

Nucleic Acids Res. 2002 Sep 1;30(17):3894-900.


SNPdbe: constructing an nsSNP functional impacts database.

Schaefer C, Meier A, Rost B, Bromberg Y.

Bioinformatics. 2012 Feb 15;28(4):601-2. doi: 10.1093/bioinformatics/btr705. Epub 2011 Dec 30.


Snap: an integrated SNP annotation platform.

Li S, Ma L, Li H, Vang S, Hu Y, Bolund L, Wang J.

Nucleic Acids Res. 2007 Jan;35(Database issue):D707-10. Epub 2006 Nov 29.


WASP: a Web-based Allele-Specific PCR assay designing tool for detecting SNPs and mutations.

Wangkumhang P, Chaichoompu K, Ngamphiw C, Ruangrit U, Chanprasert J, Assawamakin A, Tongsima S.

BMC Genomics. 2007 Aug 14;8:275.


GeneCards Version 3: the human gene integrator.

Safran M, Dalah I, Alexander J, Rosen N, Iny Stein T, Shmoish M, Nativ N, Bahir I, Doniger T, Krug H, Sirota-Madi A, Olender T, Golan Y, Stelzer G, Harel A, Lancet D.

Database (Oxford). 2010 Aug 5;2010:baq020. doi: 10.1093/database/baq020.


FunctSNP: an R package to link SNPs to functional knowledge and dbAutoMaker: a suite of Perl scripts to build SNP databases.

Goodswen SJ, Gondro C, Watson-Haigh NS, Kadarmideen HN.

BMC Bioinformatics. 2010 Jun 9;11:311. doi: 10.1186/1471-2105-11-311.

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