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Items: 1 to 20 of 270

1.

Comparison of hybridization-based and sequencing-based gene expression technologies on biological replicates.

Liu F, Jenssen TK, Trimarchi J, Punzo C, Cepko CL, Ohno-Machado L, Hovig E, Kuo WP.

BMC Genomics. 2007 Jun 7;8:153.

2.

The chemiluminescence based Ziplex automated workstation focus array reproduces ovarian cancer Affymetrix GeneChip expression profiles.

Quinn MC, Wilson DJ, Young F, Dempsey AA, Arcand SL, Birch AH, Wojnarowicz PM, Provencher D, Mes-Masson AM, Englert D, Tonin PN.

J Transl Med. 2009 Jul 6;7:55. doi: 10.1186/1479-5876-7-55.

3.

A comparison of oligonucleotide and cDNA-based microarray systems.

Mah N, Thelin A, Lu T, Nikolaus S, Kühbacher T, Gurbuz Y, Eickhoff H, Klöppel G, Lehrach H, Mellgård B, Costello CM, Schreiber S.

Physiol Genomics. 2004 Feb 13;16(3):361-70.

PMID:
14645736
4.

Methods for evaluating gene expression from Affymetrix microarray datasets.

Jiang N, Leach LJ, Hu X, Potokina E, Jia T, Druka A, Waugh R, Kearsey MJ, Luo ZW.

BMC Bioinformatics. 2008 Jun 17;9:284. doi: 10.1186/1471-2105-9-284.

5.

RefSeq refinements of UniGene-based gene matching improve the correlation of expression measurements between two microarray platforms.

Ji Y, Coombes K, Zhang J, Wen S, Mitchell J, Pusztai L, Symmans WF, Wang J.

Appl Bioinformatics. 2006;5(2):89-98.

PMID:
16722773
6.

Performance comparison of two microarray platforms to assess differential gene expression in human monocyte and macrophage cells.

Maouche S, Poirier O, Godefroy T, Olaso R, Gut I, Collet JP, Montalescot G, Cambien F.

BMC Genomics. 2008 Jun 25;9:302. doi: 10.1186/1471-2164-9-302.

7.

A comparison of microarray and MPSS technology platforms for expression analysis of Arabidopsis.

Chen J, Agrawal V, Rattray M, West MA, St Clair DA, Michelmore RW, Coughlan SJ, Meyers BC.

BMC Genomics. 2007 Nov 12;8:414.

8.

Analysis of matched mRNA measurements from two different microarray technologies.

Kuo WP, Jenssen TK, Butte AJ, Ohno-Machado L, Kohane IS.

Bioinformatics. 2002 Mar;18(3):405-12.

PMID:
11934739
9.
10.

Evaluation of DNA microarray results with quantitative gene expression platforms.

Canales RD, Luo Y, Willey JC, Austermiller B, Barbacioru CC, Boysen C, Hunkapiller K, Jensen RV, Knight CR, Lee KY, Ma Y, Maqsodi B, Papallo A, Peters EH, Poulter K, Ruppel PL, Samaha RR, Shi L, Yang W, Zhang L, Goodsaid FM.

Nat Biotechnol. 2006 Sep;24(9):1115-22.

PMID:
16964225
11.

Development of a cDNA microarray of zebra mussel (Dreissena polymorpha) foot and its use in understanding the early stage of underwater adhesion.

Xu W, Faisal M.

Gene. 2009 May 1;436(1-2):71-80. doi: 10.1016/j.gene.2009.01.007. Epub 2009 Jan 23.

PMID:
19393183
12.

Reproducibility of microarray data: a further analysis of microarray quality control (MAQC) data.

Chen JJ, Hsueh HM, Delongchamp RR, Lin CJ, Tsai CA.

BMC Bioinformatics. 2007 Oct 25;8:412.

13.

Scaling of gene expression data allowing the comparison of different gene expression platforms.

van Ruissen F, Schaaf GJ, Kool M, Baas F, Ruijter JM.

Methods Mol Biol. 2008;387:169-83.

PMID:
18287631
14.

Robust detection and genotyping of single feature polymorphisms from gene expression data.

Wang M, Hu X, Li G, Leach LJ, Potokina E, Druka A, Waugh R, Kearsey MJ, Luo Z.

PLoS Comput Biol. 2009 Mar;5(3):e1000317. doi: 10.1371/journal.pcbi.1000317. Epub 2009 Mar 13.

15.

Design and evaluation of Actichip, a thematic microarray for the study of the actin cytoskeleton.

Muller J, Mehlen A, Vetter G, Yatskou M, Muller A, Chalmel F, Poch O, Friederich E, Vallar L.

BMC Genomics. 2007 Aug 29;8:294.

16.

MicroArray Facility: a laboratory information management system with extended support for Nylon based technologies.

Honoré P, Granjeaud S, Tagett R, Deraco S, Beaudoing E, Rougemont J, Debono S, Hingamp P.

BMC Genomics. 2006 Sep 20;7:240.

17.

Patient-based cross-platform comparison of oligonucleotide microarray expression profiles.

Schlingemann J, Habtemichael N, Ittrich C, Toedt G, Kramer H, Hambek M, Knecht R, Lichter P, Stauber R, Hahn M.

Lab Invest. 2005 Aug;85(8):1024-39.

18.

Evaluation of a genomics platform for cross-species transcriptome analysis of recombinant CHO cells.

Ernst W, Trummer E, Mead J, Bessant C, Strelec H, Katinger H, Hesse F.

Biotechnol J. 2006 Jun;1(6):639-50.

PMID:
16892312
19.

Can subtle changes in gene expression be consistently detected with different microarray platforms?

Pedotti P, 't Hoen PA, Vreugdenhil E, Schenk GJ, Vossen RH, Ariyurek Y, de Hollander M, Kuiper R, van Ommen GJ, den Dunnen JT, Boer JM, de Menezes RX.

BMC Genomics. 2008 Mar 10;9:124. doi: 10.1186/1471-2164-9-124.

20.

On-chip hybridization kinetics for optimization of gene expression experiments.

Khomyakova E, Livshits MA, Steinhauser MC, Dauphinot L, Cohen-Kaminsky S, Rossier J, Soussaline F, Potier MC.

Biotechniques. 2008 Jan;44(1):109-17.

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