Format
Sort by
Items per page

Send to

Choose Destination

Links from PubMed

Items: 1 to 20 of 120

1.

Analysis of the vertebrate insulator protein CTCF-binding sites in the human genome.

Kim TH, Abdullaev ZK, Smith AD, Ching KA, Loukinov DI, Green RD, Zhang MQ, Lobanenkov VV, Ren B.

Cell. 2007 Mar 23;128(6):1231-45.

2.

Comprehensive identification and annotation of cell type-specific and ubiquitous CTCF-binding sites in the human genome.

Chen H, Tian Y, Shu W, Bo X, Wang S.

PLoS One. 2012;7(7):e41374. doi: 10.1371/journal.pone.0041374. Epub 2012 Jul 19.

4.

Systematic discovery of regulatory motifs in conserved regions of the human genome, including thousands of CTCF insulator sites.

Xie X, Mikkelsen TS, Gnirke A, Lindblad-Toh K, Kellis M, Lander ES.

Proc Natl Acad Sci U S A. 2007 Apr 24;104(17):7145-50. Epub 2007 Apr 18.

5.

CTCF genomic binding sites in Drosophila and the organisation of the bithorax complex.

Holohan EE, Kwong C, Adryan B, Bartkuhn M, Herold M, Renkawitz R, Russell S, White R.

PLoS Genet. 2007 Jul;3(7):e112.

6.

Global analysis of the insulator binding protein CTCF in chromatin barrier regions reveals demarcation of active and repressive domains.

Cuddapah S, Jothi R, Schones DE, Roh TY, Cui K, Zhao K.

Genome Res. 2009 Jan;19(1):24-32. doi: 10.1101/gr.082800.108. Epub 2008 Dec 3.

7.

The phylogenetic distribution of non-CTCF insulator proteins is limited to insects and reveals that BEAF-32 is Drosophila lineage specific.

Schoborg TA, Labrador M.

J Mol Evol. 2010 Jan;70(1):74-84. doi: 10.1007/s00239-009-9310-x. Epub 2009 Dec 19. Erratum in: J Mol Evol. 2010 Apr;70(4):403.

PMID:
20024537
8.

CTCFBSDB: a CTCF-binding site database for characterization of vertebrate genomic insulators.

Bao L, Zhou M, Cui Y.

Nucleic Acids Res. 2008 Jan;36(Database issue):D83-7. Epub 2007 Nov 2.

9.

DNA methylation-independent removable insulator controls chromatin remodeling at the HOXA locus via retinoic acid signaling.

Ishihara K, Nakamoto M, Nakao M.

Hum Mol Genet. 2016 Dec 15;25(24):5383-5394. doi: 10.1093/hmg/ddw354.

PMID:
27798106
10.

CTCF-dependent chromatin insulator is linked to epigenetic remodeling.

Ishihara K, Oshimura M, Nakao M.

Mol Cell. 2006 Sep 1;23(5):733-42.

11.

Loss of the insulator protein CTCF during nematode evolution.

Heger P, Marin B, Schierenberg E.

BMC Mol Biol. 2009 Aug 27;10:84. doi: 10.1186/1471-2199-10-84.

12.

Genome-wide CTCF distribution in vertebrates defines equivalent sites that aid the identification of disease-associated genes.

Martin D, Pantoja C, Fernández Miñán A, Valdes-Quezada C, Moltó E, Matesanz F, Bogdanović O, de la Calle-Mustienes E, Domínguez O, Taher L, Furlan-Magaril M, Alcina A, Cañón S, Fedetz M, Blasco MA, Pereira PS, Ovcharenko I, Recillas-Targa F, Montoliu L, Manzanares M, Guigó R, Serrano M, Casares F, Gómez-Skarmeta JL.

Nat Struct Mol Biol. 2011 Jun;18(6):708-14. doi: 10.1038/nsmb.2059. Epub 2011 May 22. Erratum in: Nat Struct Mol Biol. 2011 Sep;18(9):1084.

13.

Architectural roles of multiple chromatin insulators at the human apolipoprotein gene cluster.

Mishiro T, Ishihara K, Hino S, Tsutsumi S, Aburatani H, Shirahige K, Kinoshita Y, Nakao M.

EMBO J. 2009 May 6;28(9):1234-45. doi: 10.1038/emboj.2009.81. Epub 2009 Mar 26.

14.

Genomic discovery of potent chromatin insulators for human gene therapy.

Liu M, Maurano MT, Wang H, Qi H, Song CZ, Navas PA, Emery DW, Stamatoyannopoulos JA, Stamatoyannopoulos G.

Nat Biotechnol. 2015 Feb;33(2):198-203. doi: 10.1038/nbt.3062. Epub 2015 Jan 12.

PMID:
25580597
15.

Drosophila CTCF tandemly aligns with other insulator proteins at the borders of H3K27me3 domains.

Van Bortle K, Ramos E, Takenaka N, Yang J, Wahi JE, Corces VG.

Genome Res. 2012 Nov;22(11):2176-87. doi: 10.1101/gr.136788.111. Epub 2012 Jun 21.

16.

Genome wide ChIP-chip analyses reveal important roles for CTCF in Drosophila genome organization.

Smith ST, Wickramasinghe P, Olson A, Loukinov D, Lin L, Deng J, Xiong Y, Rux J, Sachidanandam R, Sun H, Lobanenkov V, Zhou J.

Dev Biol. 2009 Apr 15;328(2):518-28. doi: 10.1016/j.ydbio.2008.12.039. Epub 2009 Jan 8.

17.

CTCF interacts with and recruits the largest subunit of RNA polymerase II to CTCF target sites genome-wide.

Chernukhin I, Shamsuddin S, Kang SY, Bergström R, Kwon YW, Yu W, Whitehead J, Mukhopadhyay R, Docquier F, Farrar D, Morrison I, Vigneron M, Wu SY, Chiang CM, Loukinov D, Lobanenkov V, Ohlsson R, Klenova E.

Mol Cell Biol. 2007 Mar;27(5):1631-48. Epub 2007 Jan 8.

18.

CTCF is conserved from Drosophila to humans and confers enhancer blocking of the Fab-8 insulator.

Moon H, Filippova G, Loukinov D, Pugacheva E, Chen Q, Smith ST, Munhall A, Grewe B, Bartkuhn M, Arnold R, Burke LJ, Renkawitz-Pohl R, Ohlsson R, Zhou J, Renkawitz R, Lobanenkov V.

EMBO Rep. 2005 Feb;6(2):165-70.

19.

Waves of retrotransposon expansion remodel genome organization and CTCF binding in multiple mammalian lineages.

Schmidt D, Schwalie PC, Wilson MD, Ballester B, Gonçalves A, Kutter C, Brown GD, Marshall A, Flicek P, Odom DT.

Cell. 2012 Jan 20;148(1-2):335-48. doi: 10.1016/j.cell.2011.11.058. Epub 2012 Jan 12. Erratum in: Cell. 2012 Feb 17;148(4):832.

20.

Supplemental Content

Support Center