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Items: 1 to 20 of 95

1.

A chromatin-mediated mechanism for specification of conditional transcription factor targets.

Buck MJ, Lieb JD.

Nat Genet. 2006 Dec;38(12):1446-51. Epub 2006 Nov 12.

2.

Roles of transcription factor Mot3 and chromatin in repression of the hypoxic gene ANB1 in yeast.

Kastaniotis AJ, Mennella TA, Konrad C, Torres AM, Zitomer RS.

Mol Cell Biol. 2000 Oct;20(19):7088-98.

3.

Global nucleosome occupancy in yeast.

Bernstein BE, Liu CL, Humphrey EL, Perlstein EO, Schreiber SL.

Genome Biol. 2004;5(9):R62. Epub 2004 Aug 20.

4.

Tup1 stabilizes promoter nucleosome positioning and occupancy at transcriptionally plastic genes.

Rizzo JM, Mieczkowski PA, Buck MJ.

Nucleic Acids Res. 2011 Nov 1;39(20):8803-19. doi: 10.1093/nar/gkr557. Epub 2011 Jul 23.

5.

Genome-wide protein-DNA binding dynamics suggest a molecular clutch for transcription factor function.

Lickwar CR, Mueller F, Hanlon SE, McNally JG, Lieb JD.

Nature. 2012 Apr 11;484(7393):251-5. doi: 10.1038/nature10985.

6.

The stress response factors Yap6, Cin5, Phd1, and Skn7 direct targeting of the conserved co-repressor Tup1-Ssn6 in S. cerevisiae.

Hanlon SE, Rizzo JM, Tatomer DC, Lieb JD, Buck MJ.

PLoS One. 2011 Apr 28;6(4):e19060. doi: 10.1371/journal.pone.0019060.

7.

Recruitment of Tup1-Ssn6 by yeast hypoxic genes and chromatin-independent exclusion of TATA binding protein.

Mennella TA, Klinkenberg LG, Zitomer RS.

Eukaryot Cell. 2003 Dec;2(6):1288-303.

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10.

Rap1 relocalization contributes to the chromatin-mediated gene expression profile and pace of cell senescence.

Platt JM, Ryvkin P, Wanat JJ, Donahue G, Ricketts MD, Barrett SP, Waters HJ, Song S, Chavez A, Abdallah KO, Master SR, Wang LS, Johnson FB.

Genes Dev. 2013 Jun 15;27(12):1406-20. doi: 10.1101/gad.218776.113. Epub 2013 Jun 11.

11.

The Cyc8-Tup1 complex inhibits transcription primarily by masking the activation domain of the recruiting protein.

Wong KH, Struhl K.

Genes Dev. 2011 Dec 1;25(23):2525-39. doi: 10.1101/gad.179275.111.

12.

Sfl1 functions via the co-repressor Ssn6-Tup1 and the cAMP-dependent protein kinase Tpk2.

Conlan RS, Tzamarias D.

J Mol Biol. 2001 Jun 22;309(5):1007-15.

PMID:
11399075
13.

Characterization of the yeast telomere nucleoprotein core: Rap1 binds independently to each recognition site.

Williams TL, Levy DL, Maki-Yonekura S, Yonekura K, Blackburn EH.

J Biol Chem. 2010 Nov 12;285(46):35814-24. doi: 10.1074/jbc.M110.170167. Epub 2010 Sep 7.

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16.

Distinguishing direct versus indirect transcription factor-DNA interactions.

Gordân R, Hartemink AJ, Bulyk ML.

Genome Res. 2009 Nov;19(11):2090-100. doi: 10.1101/gr.094144.109. Epub 2009 Aug 3.

17.

Interaction of transcriptional regulators with specific nucleosomes across the Saccharomyces genome.

Koerber RT, Rhee HS, Jiang C, Pugh BF.

Mol Cell. 2009 Sep 24;35(6):889-902. doi: 10.1016/j.molcel.2009.09.011.

18.

Genome-wide analysis of the functions of a conserved surface on the corepressor Tup1.

Green SR, Johnson AD.

Mol Biol Cell. 2005 Jun;16(6):2605-13. Epub 2005 Mar 23.

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20.

The N-terminal and C-terminal domains of RAP1 are dispensable for chromatin opening and GCN4-mediated HIS4 activation in budding yeast.

Yu L, Sabet N, Chambers A, Morse RH.

J Biol Chem. 2001 Aug 31;276(35):33257-64. Epub 2001 Jun 18.

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