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Items: 1 to 20 of 4358

1.

GeneTools--application for functional annotation and statistical hypothesis testing.

Beisvag V, Jünge FK, Bergum H, Jølsum L, Lydersen S, Günther CC, Ramampiaro H, Langaas M, Sandvik AK, Laegreid A.

BMC Bioinformatics. 2006 Oct 24;7:470.

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annot8r: GO, EC and KEGG annotation of EST datasets.

Schmid R, Blaxter ML.

BMC Bioinformatics. 2008 Apr 9;9:180. doi: 10.1186/1471-2105-9-180.

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7.

Version VI of the ESTree db: an improved tool for peach transcriptome analysis.

Lazzari B, Caprera A, Vecchietti A, Merelli I, Barale F, Milanesi L, Stella A, Pozzi C.

BMC Bioinformatics. 2008 Mar 26;9 Suppl 2:S9. doi: 10.1186/1471-2105-9-S2-S9.

8.

GEM-TREND: a web tool for gene expression data mining toward relevant network discovery.

Feng C, Araki M, Kunimoto R, Tamon A, Makiguchi H, Niijima S, Tsujimoto G, Okuno Y.

BMC Genomics. 2009 Sep 3;10:411. doi: 10.1186/1471-2164-10-411.

9.

The genopolis microarray database.

Splendiani A, Brandizi M, Even G, Beretta O, Pavelka N, Pelizzola M, Mayhaus M, Foti M, Mauri G, Ricciardi-Castagnoli P.

BMC Bioinformatics. 2007 Mar 8;8 Suppl 1:S21.

10.

ESTuber db: an online database for Tuber borchii EST sequences.

Lazzari B, Caprera A, Cosentino C, Stella A, Milanesi L, Viotti A.

BMC Bioinformatics. 2007 Mar 8;8 Suppl 1:S13.

11.

GObar: a gene ontology based analysis and visualization tool for gene sets.

Lee JS, Katari G, Sachidanandam R.

BMC Bioinformatics. 2005 Jul 25;6:189.

12.

Gene ontology application to genomic functional annotation, statistical analysis and knowledge mining.

Martucci D, Masseroli M, Pinciroli F.

Stud Health Technol Inform. 2004;102:108-31.

PMID:
15853267
13.

Annotation-Modules: a tool for finding significant combinations of multisource annotations for gene lists.

Hackenberg M, Matthiesen R.

Bioinformatics. 2008 Jun 1;24(11):1386-93. doi: 10.1093/bioinformatics/btn178. Epub 2008 Apr 23.

PMID:
18434345
14.

CGKB: an annotation knowledge base for cowpea (Vigna unguiculata L.) methylation filtered genomic genespace sequences.

Chen X, Laudeman TW, Rushton PJ, Spraggins TA, Timko MP.

BMC Bioinformatics. 2007 Apr 19;8:129.

15.

GOrilla: a tool for discovery and visualization of enriched GO terms in ranked gene lists.

Eden E, Navon R, Steinfeld I, Lipson D, Yakhini Z.

BMC Bioinformatics. 2009 Feb 3;10:48. doi: 10.1186/1471-2105-10-48.

16.

PLATCOM: a Platform for Computational Comparative Genomics.

Choi K, Ma Y, Choi JH, Kim S.

Bioinformatics. 2005 May 15;21(10):2514-6. Epub 2005 Feb 24.

PMID:
15731206
17.

TF Target Mapper: a BLAST search tool for the identification of Transcription Factor target genes.

Horsman S, Moorhouse MJ, de Jager VC, van der Spek P, Grosveld F, Strouboulis J, Katsantoni EZ.

BMC Bioinformatics. 2006 Mar 8;7:120.

18.

PROMPT: a protein mapping and comparison tool.

Schmidt T, Frishman D.

BMC Bioinformatics. 2006 Jul 4;7:331.

19.

Gene Class expression: analysis tool of Gene Ontology terms with gene expression data.

Pereira GS, Brandão RM, Giuliatti S, Zago MA, Silva WA Jr.

Genet Mol Res. 2006 Mar 31;5(1):108-14.

20.

MyWEST: my Web Extraction Software Tool for effective mining of annotations from web-based databanks.

Masseroli M, Stella A, Meani N, Alcalay M, Pinciroli F.

Bioinformatics. 2004 Dec 12;20(18):3326-35. Epub 2004 Jul 9.

PMID:
15247102

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