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Items: 1 to 20 of 102

1.

A comprehensive library of fluorescent transcriptional reporters for Escherichia coli.

Zaslaver A, Bren A, Ronen M, Itzkovitz S, Kikoin I, Shavit S, Liebermeister W, Surette MG, Alon U.

Nat Methods. 2006 Aug;3(8):623-8.

PMID:
16862137
2.

Hypothesis-driven approach to predict transcriptional units from gene expression data.

Steinhauser D, Junker BH, Luedemann A, Selbig J, Kopka J.

Bioinformatics. 2004 Aug 12;20(12):1928-39. Epub 2004 Mar 25.

PMID:
15044239
3.

A 750 bp sensory integration region directs global control of the Escherichia coli GadE acid resistance regulator.

Sayed AK, Foster JW.

Mol Microbiol. 2009 Mar;71(6):1435-50. doi: 10.1111/j.1365-2958.2009.06614.x. Epub 2009 Feb 11.

4.

Reconstruction of Escherichia coli transcriptional regulatory networks via regulon-based associations.

Zare H, Sangurdekar D, Srivastava P, Kaveh M, Khodursky A.

BMC Syst Biol. 2009 Apr 14;3:39. doi: 10.1186/1752-0509-3-39.

5.

Analysis of the sfaX(II) locus in the Escherichia coli meningitis isolate IHE3034 reveals two novel regulatory genes within the promoter-distal region of the main S fimbrial operon.

Sjöström AE, Sondén B, Müller C, Rydström A, Dobrindt U, Wai SN, Uhlin BE.

Microb Pathog. 2009 Mar;46(3):150-8. doi: 10.1016/j.micpath.2008.12.001. Epub 2008 Dec 13.

PMID:
19103276
6.

Expression of highly toxic genes in E. coli: special strategies and genetic tools.

Saïda F, Uzan M, Odaert B, Bontems F.

Curr Protein Pept Sci. 2006 Feb;7(1):47-56. Review.

PMID:
16472168
7.

A rapid reporter system using GFP as a reporter protein for identification and screening of synthetic stationary-phase promoters in Escherichia coli.

Miksch G, Bettenworth F, Friehs K, Flaschel E, Saalbach A, Nattkemper TW.

Appl Microbiol Biotechnol. 2006 Mar;70(2):229-36. Epub 2005 Jul 13.

PMID:
16012833
8.
9.

Prokaryotic real-time gene expression profiling for toxicity assessment.

Onnis-Hayden A, Weng H, He M, Hansen S, Ilyin V, Lewis K, Guc AZ.

Environ Sci Technol. 2009 Jun 15;43(12):4574-81.

PMID:
19603679
10.

The incoherent feed-forward loop accelerates the response-time of the gal system of Escherichia coli.

Mangan S, Itzkovitz S, Zaslaver A, Alon U.

J Mol Biol. 2006 Mar 10;356(5):1073-81. Epub 2005 Dec 19.

PMID:
16406067
11.

Glyoxylate and pyruvate are antagonistic effectors of the Escherichia coli IclR transcriptional regulator.

Lorca GL, Ezersky A, Lunin VV, Walker JR, Altamentova S, Evdokimova E, Vedadi M, Bochkarev A, Savchenko A.

J Biol Chem. 2007 Jun 1;282(22):16476-91. Epub 2007 Apr 10.

12.

Dual fluorescence system for flow cytometric analysis of Escherichia coli transcriptional response in multi-species context.

Miao H, Ratnasingam S, Pu CS, Desai MM, Sze CC.

J Microbiol Methods. 2009 Feb;76(2):109-19. doi: 10.1016/j.mimet.2008.09.015. Epub 2008 Sep 24.

PMID:
18926860
13.

Monitoring of transcriptome and proteome profiles to investigate the cellular response of E. coli towards recombinant protein expression under defined chemostat conditions.

Dürrschmid K, Reischer H, Schmidt-Heck W, Hrebicek T, Guthke R, Rizzi A, Bayer K.

J Biotechnol. 2008 May 20;135(1):34-44. doi: 10.1016/j.jbiotec.2008.02.013. Epub 2008 Mar 4.

PMID:
18405993
14.

Just-in-time transcription program in metabolic pathways.

Zaslaver A, Mayo AE, Rosenberg R, Bashkin P, Sberro H, Tsalyuk M, Surette MG, Alon U.

Nat Genet. 2004 May;36(5):486-91. Epub 2004 Apr 25.

15.

Genomics. E. coli, what a noisy bug.

Tyagi S.

Science. 2010 Jul 30;329(5991):518-9. doi: 10.1126/science.1194036. No abstract available.

PMID:
20671174
16.
17.
18.

Negative autoregulation speeds the response times of transcription networks.

Rosenfeld N, Elowitz MB, Alon U.

J Mol Biol. 2002 Nov 8;323(5):785-93.

PMID:
12417193
19.

Libraries of synthetic stationary-phase and stress promoters as a tool for fine-tuning of expression of recombinant proteins in Escherichia coli.

Miksch G, Bettenworth F, Friehs K, Flaschel E, Saalbach A, Twellmann T, Nattkemper TW.

J Biotechnol. 2005 Oct 17;120(1):25-37. Epub 2005 Jul 12.

PMID:
16019099
20.

Complete set of ORF clones of Escherichia coli ASKA library (a complete set of E. coli K-12 ORF archive): unique resources for biological research.

Kitagawa M, Ara T, Arifuzzaman M, Ioka-Nakamichi T, Inamoto E, Toyonaga H, Mori H.

DNA Res. 2005;12(5):291-9. Epub 2006 Jan 9.

PMID:
16769691

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