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Items: 1 to 20 of 102

1.

Emergent properties of reduced-genome Escherichia coli.

Pósfai G, Plunkett G 3rd, Fehér T, Frisch D, Keil GM, Umenhoffer K, Kolisnychenko V, Stahl B, Sharma SS, de Arruda M, Burland V, Harcum SW, Blattner FR.

Science. 2006 May 19;312(5776):1044-6. Epub 2006 Apr 27.

2.

The applications of systematic in-frame, single-gene knockout mutant collection of Escherichia coli K-12.

Baba T, Huan HC, Datsenko K, Wanner BL, Mori H.

Methods Mol Biol. 2008;416:183-94. doi: 10.1007/978-1-59745-321-9_12.

PMID:
18392968
3.

Understanding the differences between genome sequences of Escherichia coli B strains REL606 and BL21(DE3) and comparison of the E. coli B and K-12 genomes.

Studier FW, Daegelen P, Lenski RE, Maslov S, Kim JF.

J Mol Biol. 2009 Dec 11;394(4):653-80. doi: 10.1016/j.jmb.2009.09.021. Epub 2009 Sep 15.

PMID:
19765592
4.

Minimization of the Escherichia coli genome using the Tn5-targeted Cre/loxP excision system.

Yu BJ, Kim C.

Methods Mol Biol. 2008;416:261-77. doi: 10.1007/978-1-59745-321-9_17.

PMID:
18392973
5.

Minimization of the Escherichia coli genome using a Tn5-targeted Cre/loxP excision system.

Yu BJ, Sung BH, Koob MD, Lee CH, Lee JH, Lee WS, Kim MS, Kim SC.

Nat Biotechnol. 2002 Oct;20(10):1018-23. Epub 2002 Sep 16.

PMID:
12244329
6.

Expression of two recombinant chloramphenicol acetyltransferase variants in highly reduced genome Escherichia coli strains.

Sharma SS, Campbell JW, Frisch D, Blattner FR, Harcum SW.

Biotechnol Bioeng. 2007 Dec 1;98(5):1056-70.

PMID:
17497738
7.

A novel, simple, high-throughput method for isolation of genome-wide transposon insertion mutants of Escherichia coli K-12.

Miki T, Yamamoto Y, Matsuda H.

Methods Mol Biol. 2008;416:195-204. doi: 10.1007/978-1-59745-321-9_13.

PMID:
18392969
8.

Genome-wide screening of genes affecting glycogen metabolism in Escherichia coli K-12.

Eydallin G, Viale AM, Morán-Zorzano MT, Muñoz FJ, Montero M, Baroja-Fernández E, Pozueta-Romero J.

FEBS Lett. 2007 Jun 26;581(16):2947-53. Epub 2007 May 25.

9.

Scarless engineering of the Escherichia coli genome.

Fehér T, Karcagi I, Gyorfy Z, Umenhoffer K, Csörgo B, Pósfai G.

Methods Mol Biol. 2008;416:251-9. doi: 10.1007/978-1-59745-321-9_16.

PMID:
18392972
10.

Phenotypic screening of Escherichia coli K-12 Tn5 insertion libraries, using whole-genome oligonucleotide microarrays.

Winterberg KM, Luecke J, Bruegl AS, Reznikoff WS.

Appl Environ Microbiol. 2005 Jan;71(1):451-9.

11.

Over-representation of Chi sequences caused by di-codon increase in Escherichia coli K-12.

Uno R, Nakayama Y, Tomita M.

Gene. 2006 Sep 15;380(1):30-7. Epub 2006 Jun 2.

PMID:
16854534
12.

Role of menaquinone biosynthesis genes in selenate reduction by Enterobacter cloacae SLD1a-1 and Escherichia coli K12.

Ma J, Kobayashi DY, Yee N.

Environ Microbiol. 2009 Jan;11(1):149-58. doi: 10.1111/j.1462-2920.2008.01749.x. Epub 2008 Sep 22.

PMID:
18811645
13.

IS elements as constituents of bacterial genomes.

Mahillon J, Léonard C, Chandler M.

Res Microbiol. 1999 Nov-Dec;150(9-10):675-87. Review.

PMID:
10673006
14.

Comparative genome mapping with mobile physical map landmarks.

Bloch CA, Rode CK, Obreque V, Russell KY.

J Bacteriol. 1994 Nov;176(22):7121-5.

15.

Systematic genome-wide scanning for genes involved in ATP generation in Escherichia coli.

Hara KY, Shimodate N, Ito M, Baba T, Mori H, Mori H.

Metab Eng. 2009 Jan;11(1):1-7. doi: 10.1016/j.ymben.2008.07.003. Epub 2008 Jul 26.

PMID:
18718549
16.

Transcript analysis of Escherichia coli K-12 insertion element IS5.

Sawers RG.

FEMS Microbiol Lett. 2005 Mar 15;244(2):397-401.

17.

The plasticity of global proteome and genome expression analyzed in closely related W3110 and MG1655 strains of a well-studied model organism, Escherichia coli-K12.

Vijayendran C, Polen T, Wendisch VF, Friehs K, Niehaus K, Flaschel E.

J Biotechnol. 2007 Mar 10;128(4):747-61. Epub 2007 Jan 14.

PMID:
17331609
18.

Comparative analysis of essential genes and nonessential genes in Escherichia coli K12.

Gong X, Fan S, Bilderbeck A, Li M, Pang H, Tao S.

Mol Genet Genomics. 2008 Jan;279(1):87-94. Epub 2007 Oct 18.

PMID:
17943314
19.

Complete genome sequence and comparative analysis of the wild-type commensal Escherichia coli strain SE11 isolated from a healthy adult.

Oshima K, Toh H, Ogura Y, Sasamoto H, Morita H, Park SH, Ooka T, Iyoda S, Taylor TD, Hayashi T, Itoh K, Hattori M.

DNA Res. 2008 Dec;15(6):375-86. doi: 10.1093/dnares/dsn026. Epub 2008 Oct 17.

20.

Rapid and efficient construction of markerless deletions in the Escherichia coli genome.

Yu BJ, Kang KH, Lee JH, Sung BH, Kim MS, Kim SC.

Nucleic Acids Res. 2008 Aug;36(14):e84. doi: 10.1093/nar/gkn359. Epub 2008 Jun 21.

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