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Items: 1 to 20 of 68

1.

CAGE: cap analysis of gene expression.

Kodzius R, Kojima M, Nishiyori H, Nakamura M, Fukuda S, Tagami M, Sasaki D, Imamura K, Kai C, Harbers M, Hayashizaki Y, Carninci P.

Nat Methods. 2006 Mar;3(3):211-22. No abstract available.

PMID:
16489339
2.

[Cap analysis gene expression: CAGE].

Nakamura M, Carninci P.

Tanpakushitsu Kakusan Koso. 2004 Dec;49(17 Suppl):2688-93. Review. Japanese. No abstract available.

PMID:
15669240
3.

A rescue strategy for multimapping short sequence tags refines surveys of transcriptional activity by CAGE.

Faulkner GJ, Forrest AR, Chalk AM, Schroder K, Hayashizaki Y, Carninci P, Hume DA, Grimmond SM.

Genomics. 2008 Mar;91(3):281-8. doi: 10.1016/j.ygeno.2007.11.003.

4.

CAGE (cap analysis of gene expression): a protocol for the detection of promoter and transcriptional networks.

Takahashi H, Kato S, Murata M, Carninci P.

Methods Mol Biol. 2012;786:181-200. doi: 10.1007/978-1-61779-292-2_11.

5.

[Innovation of transcriptome analysis].

Miura H, Tomaru Y, Hayashizaki Y.

Tanpakushitsu Kakusan Koso. 2006 Dec;51(16 Suppl):2413-9. Review. Japanese. No abstract available.

PMID:
17471956
6.

[Determination of transcription start sites: CAGE & GIS tag sequences].

Shinji K.

Tanpakushitsu Kakusan Koso. 2004 Dec;49(17 Suppl):2701-3. Review. Japanese. No abstract available.

PMID:
15669242
7.

Cap analysis gene expression for high-throughput analysis of transcriptional starting point and identification of promoter usage.

Shiraki T, Kondo S, Katayama S, Waki K, Kasukawa T, Kawaji H, Kodzius R, Watahiki A, Nakamura M, Arakawa T, Fukuda S, Sasaki D, Podhajska A, Harbers M, Kawai J, Carninci P, Hayashizaki Y.

Proc Natl Acad Sci U S A. 2003 Dec 23;100(26):15776-81.

8.

[Transcriptome analyses and transcriptome databases].

Suzuki Y, Yamashita R, Nakai K, Sugano S.

Tanpakushitsu Kakusan Koso. 2004 Aug;49(11 Suppl):1859-65. Review. Japanese. No abstract available.

PMID:
15377029
9.

Deep cap analysis gene expression (CAGE): genome-wide identification of promoters, quantification of their expression, and network inference.

de Hoon M, Hayashizaki Y.

Biotechniques. 2008 Apr;44(5):627-8, 630, 632. doi: 10.2144/000112802. Review.

10.

Report of the ninth international workshop on the identification of transcribed sequences.

Gardiner K, Mural R, Werner T.

Cytogenet Cell Genet. 2000;88(1-2):1-10. No abstract available.

PMID:
10773655
11.

[RTPS].

Kasukawa T.

Tanpakushitsu Kakusan Koso. 2004 Dec;49(17 Suppl):2871-6. Review. Japanese. No abstract available.

PMID:
15669269
12.

Gene expression analysis goes digital.

Velculescu VE, Kinzler KW.

Nat Biotechnol. 2007 Aug;25(8):878-80. No abstract available.

PMID:
17687366
13.

Detecting expressed genes using CAGE.

Murata M, Nishiyori-Sueki H, Kojima-Ishiyama M, Carninci P, Hayashizaki Y, Itoh M.

Methods Mol Biol. 2014;1164:67-85. doi: 10.1007/978-1-4939-0805-9_7.

PMID:
24927836
14.

Fine expression profiling of full-length transcripts using a size-unbiased cDNA library prepared with the vector-capping method.

Oshikawa M, Sugai Y, Usami R, Ohtoko K, Toyama S, Kato S.

DNA Res. 2008 Jun 30;15(3):123-36. doi: 10.1093/dnares/dsn010.

15.

Unamplified cap analysis of gene expression on a single-molecule sequencer.

Kanamori-Katayama M, Itoh M, Kawaji H, Lassmann T, Katayama S, Kojima M, Bertin N, Kaiho A, Ninomiya N, Daub CO, Carninci P, Forrest AR, Hayashizaki Y.

Genome Res. 2011 Jul;21(7):1150-9. doi: 10.1101/gr.115469.110.

16.

Our evolving knowledge of the transcriptional landscape.

Hume DA.

Mamm Genome. 2008 Oct-Dec;19(10-12):663-6. doi: 10.1007/s00335-008-9140-y.

PMID:
18807086
17.

Development of a DNA barcode tagging method for monitoring dynamic changes in gene expression by using an ultra high-throughput sequencer.

Maeda N, Nishiyori H, Nakamura M, Kawazu C, Murata M, Sano H, Hayashida K, Fukuda S, Tagami M, Hasegawa A, Murakami K, Schroder K, Irvine K, Hume D, Hayashizaki Y, Carninci P, Suzuki H.

Biotechniques. 2008 Jul;45(1):95-7. doi: 10.2144/000112814.

18.

5' end-centered expression profiling using cap-analysis gene expression and next-generation sequencing.

Takahashi H, Lassmann T, Murata M, Carninci P.

Nat Protoc. 2012 Feb 23;7(3):542-61. doi: 10.1038/nprot.2012.005.

19.

aRNA-LongSAGE: SAGE with antisense RNA.

Heidenblut AM.

Methods Mol Biol. 2008;387:39-54.

PMID:
18287621
20.

Construction of a full-length enriched and a 5'-end enriched cDNA library using the oligo-capping method.

Suzuki Y, Sugano S.

Methods Mol Biol. 2003;221:73-91. No abstract available.

PMID:
12703735

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