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Items: 1 to 20 of 570

1.

CD4 binding partially locks the bridging sheet in gp120 but leaves the beta2/3 strands flexible.

Pan Y, Ma B, Nussinov R.

J Mol Biol. 2005 Jul 15;350(3):514-27.

PMID:
15946678
2.

Characterization of the conformational state and flexibility of HIV-1 glycoprotein gp120 core domain.

Pan Y, Ma B, Keskin O, Nussinov R.

J Biol Chem. 2004 Jul 16;279(29):30523-30. Epub 2004 May 6.

3.

Understanding of the bridging sheet formation of HIV-1 glycoprotein gp120.

Da LT, Quan JM, Wu YD.

J Phys Chem B. 2009 Oct 29;113(43):14536-43. doi: 10.1021/jp9081239.

PMID:
19813706
4.

Spontaneous rearrangement of the β20/β21 strands in simulations of unliganded HIV-1 glycoprotein, gp120.

Shrivastava IH, Wendel K, LaLonde JM.

Biochemistry. 2012 Oct 2;51(39):7783-93. doi: 10.1021/bi300878d. Epub 2012 Sep 21.

5.

Atomic insight into the CD4 binding-induced conformational changes in HIV-1 gp120.

Hsu ST, Bonvin AM.

Proteins. 2004 May 15;55(3):582-93.

PMID:
15103622
6.

Molecular motions in HIV-1 gp120 mutants reveal their preferences for different conformations.

Liu SQ, Liu CQ, Fu YX.

J Mol Graph Model. 2007 Jul;26(1):306-18. Epub 2006 Dec 15.

PMID:
17227719
7.

Local conformational stability of HIV-1 gp120 in unliganded and CD4-bound states as defined by amide hydrogen/deuterium exchange.

Kong L, Huang CC, Coales SJ, Molnar KS, Skinner J, Hamuro Y, Kwong PD.

J Virol. 2010 Oct;84(19):10311-21. doi: 10.1128/JVI.00688-10. Epub 2010 Jul 21.

8.

Molecular motions of human HIV-1 gp120 envelope glycoproteins.

Liu SQ, Liu SX, Fu YX.

J Mol Model. 2008 Sep;14(9):857-70. doi: 10.1007/s00894-008-0327-7. Epub 2008 Jul 2.

PMID:
18594881
9.

NMR studies on the conformation of the CD4 36-59 peptide bound to HIV-1 gp120.

Gizachew D, Moffett DB, Busse SC, Westler WM, Dratz EA, Teintze M.

Biochemistry. 1998 Jul 28;37(30):10616-25.

PMID:
9692951
10.

Identification of putative, stable binding regions through flexibility analysis of HIV-1 gp120.

Tan H, Rader AJ.

Proteins. 2009 Mar;74(4):881-94. doi: 10.1002/prot.22196.

PMID:
18704932
11.

Investigation of the structural components governing the polarity-dependent refolding of a CD4-binding peptide from gp120.

Graf von Stosch A, Kinzel V, Pipkorn R, Reed J.

J Mol Biol. 1995 Jul 21;250(4):507-13.

PMID:
7616571
12.
13.

Dynamics and stability of amyloid-like steric zipper assemblies with hydrophobic dry interfaces.

Vitagliano L, Stanzione F, De Simone A, Esposito L.

Biopolymers. 2009 Dec;91(12):1161-71. doi: 10.1002/bip.21182.

PMID:
19280623
14.

Towards a structure of the HIV-1 envelope glycoprotein gp120: an immunochemical approach.

Moore JP, Jameson BA, Sattentau QJ, Willey R, Sodroski J.

Philos Trans R Soc Lond B Biol Sci. 1993 Oct 29;342(1299):83-8.

PMID:
7904352
15.

Role of the amino acid sequence in domain swapping of the B1 domain of protein G.

Sirota FL, Héry-Huynh S, Maurer-Stroh S, Wodak SJ.

Proteins. 2008 Jul;72(1):88-104. doi: 10.1002/prot.21901.

PMID:
18186476
16.
18.

Range of CD4-Bound Conformations of HIV-1 gp120, as Defined Using Conditional CD4-Induced Antibodies.

Kaplan G, Roitburd-Berman A, Lewis GK, Gershoni JM.

J Virol. 2016 Apr 14;90(9):4481-93. doi: 10.1128/JVI.03206-15. Print 2016 May.

19.

Scorpion-toxin mimics of CD4 in complex with human immunodeficiency virus gp120 crystal structures, molecular mimicry, and neutralization breadth.

Huang CC, Stricher F, Martin L, Decker JM, Majeed S, Barthe P, Hendrickson WA, Robinson J, Roumestand C, Sodroski J, Wyatt R, Shaw GM, Vita C, Kwong PD.

Structure. 2005 May;13(5):755-68.

20.

Molecular dynamics simulations of the periplasmic ferric-hydroxamate binding protein FhuD.

Krewulak KD, Shepherd CM, Vogel HJ.

Biometals. 2005 Aug;18(4):375-86.

PMID:
16158230

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