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Items: 1 to 20 of 98

1.

HaploPainter: a tool for drawing pedigrees with complex haplotypes.

Thiele H, Nürnberg P.

Bioinformatics. 2005 Apr 15;21(8):1730-2. Epub 2004 Sep 17.

PMID:
15377505
2.

HAPLOT: a graphical comparison of haplotype blocks, tagSNP sets and SNP variation for multiple populations.

Gu S, Pakstis AJ, Kidd KK.

Bioinformatics. 2005 Oct 15;21(20):3938-9. Epub 2005 Aug 30.

PMID:
16131520
3.

SNP-PHAGE--High throughput SNP discovery pipeline.

Matukumalli LK, Grefenstette JJ, Hyten DL, Choi IY, Cregan PB, Van Tassell CP.

BMC Bioinformatics. 2006 Oct 23;7:468.

4.

ALOHOMORA: a tool for linkage analysis using 10K SNP array data.

Rüschendorf F, Nürnberg P.

Bioinformatics. 2005 May 1;21(9):2123-5. Epub 2005 Jan 12.

PMID:
15647291
5.

snp.plotter: an R-based SNP/haplotype association and linkage disequilibrium plotting package.

Luna A, Nicodemus KK.

Bioinformatics. 2007 Mar 15;23(6):774-6. Epub 2007 Jan 18.

PMID:
17234637
6.

VariScan: Analysis of evolutionary patterns from large-scale DNA sequence polymorphism data.

Vilella AJ, Blanco-Garcia A, Hutter S, Rozas J.

Bioinformatics. 2005 Jun 1;21(11):2791-3. Epub 2005 Apr 6.

PMID:
15814564
7.

easyLINKAGE: a PERL script for easy and automated two-/multi-point linkage analyses.

Lindner TH, Hoffmann K.

Bioinformatics. 2005 Feb 1;21(3):405-7. Epub 2004 Sep 3.

PMID:
15347576
8.

SNP-VISTA: an interactive SNP visualization tool.

Shah N, Teplitsky MV, Minovitsky S, Pennacchio LA, Hugenholtz P, Hamann B, Dubchak IL.

BMC Bioinformatics. 2005 Dec 8;6:292.

9.

Plotting haplotype-specific linkage disequilibrium patterns by extended haplotype homozygosity.

Mueller JC, Andreoli C.

Bioinformatics. 2004 Mar 22;20(5):786-7. Epub 2004 Feb 5.

PMID:
14764566
10.

HaploBlockFinder: haplotype block analyses.

Zhang K, Jin L.

Bioinformatics. 2003 Jul 1;19(10):1300-1.

PMID:
12835279
11.

HAPLORE: a program for haplotype reconstruction in general pedigrees without recombination.

Zhang K, Sun F, Zhao H.

Bioinformatics. 2005 Jan 1;21(1):90-103. Epub 2004 Jul 1.

PMID:
15231536
12.

PedSplit: pedigree management for stratified analysis.

Lanktree MB, VanderBeek L, Macciardi FM, Kennedy JL.

Bioinformatics. 2004 Sep 22;20(14):2315-6. Epub 2004 Apr 1.

PMID:
15059823
13.

Visualization of genomic aberrations using Affymetrix SNP arrays.

Müller A, Holzmann K, Kestler HA.

Bioinformatics. 2007 Feb 15;23(4):496-7. Epub 2006 Nov 30.

PMID:
17138589
14.

ProfDist: a tool for the construction of large phylogenetic trees based on profile distances.

Friedrich J, Dandekar T, Wolf M, Müller T.

Bioinformatics. 2005 May 1;21(9):2108-9. Epub 2005 Jan 27.

PMID:
15677706
15.

Pelican: pedigree editor for linkage computer analysis.

Dudbridge F, Carver T, Williams GW.

Bioinformatics. 2004 Sep 22;20(14):2327-8. Epub 2004 Apr 1.

PMID:
15059819
16.

Haploview: analysis and visualization of LD and haplotype maps.

Barrett JC, Fry B, Maller J, Daly MJ.

Bioinformatics. 2005 Jan 15;21(2):263-5. Epub 2004 Aug 5.

PMID:
15297300
17.

GEVALT: an integrated software tool for genotype analysis.

Davidovich O, Kimmel G, Shamir R.

BMC Bioinformatics. 2007 Feb 1;8:36.

18.

TAMAL: an integrated approach to choosing SNPs for genetic studies of human complex traits.

Hemminger BM, Saelim B, Sullivan PF.

Bioinformatics. 2006 Mar 1;22(5):626-7. Epub 2006 Jan 17.

PMID:
16418238
19.

The pedigree tool: web-based visualization of a family tree.

Lachmund P, Nebel IT, Führer D, Paschke R.

Hum Mutat. 2004 Feb;23(2):103-5.

PMID:
14722912
20.

The reliability of haplotyping inference in nuclear families: misassignment rates for SNPs and microsatellites.

Lindholm E, Zhang J, Hodge SE, Greenberg DA.

Hum Hered. 2004;57(3):117-27.

PMID:
15297805

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