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Items: 1 to 20 of 44

1.

A random-periods model for expression of cell-cycle genes.

Liu D, Umbach DM, Peddada SD, Li L, Crockett PW, Weinberg CR.

Proc Natl Acad Sci U S A. 2004 May 11;101(19):7240-5. Epub 2004 May 3.

2.

Interactive data analysis and clustering of genomic data.

Ciaramella A, Cocozza S, Iorio F, Miele G, Napolitano F, Pinelli M, Raiconi G, Tagliaferri R.

Neural Netw. 2008 Mar-Apr;21(2-3):368-78. doi: 10.1016/j.neunet.2007.12.026. Epub 2007 Dec 31. Erratum in: Neural Netw. 2008 May;21(4):698.

PMID:
18255261
3.

Bayesian detection of periodic mRNA time profiles without use of training examples.

Andersson CR, Isaksson A, Gustafsson MG.

BMC Bioinformatics. 2006 Feb 9;7:63.

4.

Detecting biological associations between genes based on the theory of phase synchronization.

Kim CS, Riikonen P, Salakoski T.

Biosystems. 2008 May;92(2):99-113. doi: 10.1016/j.biosystems.2007.12.006. Epub 2008 Jan 11.

PMID:
18289772
5.
6.
7.

Rhodococcus fascians infection accelerates progression of tobacco BY-2 cells into mitosis through rapid changes in plant gene expression.

Vandeputte O, Vereecke D, Mol A, Lenjou M, Van Bockstaele D, El Jaziri M, Baucher M.

New Phytol. 2007;175(1):140-54.

8.

New weakly expressed cell cycle-regulated genes in yeast.

de Lichtenberg U, Wernersson R, Jensen TS, Nielsen HB, Fausbøll A, Schmidt P, Hansen FB, Knudsen S, Brunak S.

Yeast. 2005 Nov;22(15):1191-201.

9.

Cell cycle progression in Escherichia coli B/r affects transcription of certain genes: Implications for synthetic genome design.

Echtenkamp PL, Wilson DB, Shuler ML.

Biotechnol Bioeng. 2009 Feb 15;102(3):902-9. doi: 10.1002/bit.22098.

PMID:
18823050
11.

Identification of hair cycle-associated genes from time-course gene expression profile data by using replicate variance.

Lin KK, Chudova D, Hatfield GW, Smyth P, Andersen B.

Proc Natl Acad Sci U S A. 2004 Nov 9;101(45):15955-60. Epub 2004 Nov 1.

12.

Self-Organizing Maps with Statistical Phase Synchronization (SOMPS) for analyzing cell cycle-specific gene expression data.

Kim CS.

Stat Appl Genet Mol Biol. 2008;7(1):Article1. doi: 10.2202/1544-6115.1323. Epub 2008 Jan 15.

PMID:
18241191
13.

Dynamic measure of gene co-regulation.

Farina L, De Santis A, Morelli G, Ruberti I.

IET Syst Biol. 2007 Jan;1(1):10-7.

PMID:
17370425
14.

Polynomial model approach for resynchronization analysis of cell-cycle gene expression data.

Qiu P, Wang ZJ, Liu KJ.

Bioinformatics. 2006 Apr 15;22(8):959-66. Epub 2006 Jan 24.

PMID:
16434439
15.

Cluster analysis of dynamic parameters of gene expression.

Wu X, Dewey TG.

J Bioinform Comput Biol. 2003 Oct;1(3):447-58.

PMID:
15290764
16.

Integrative genomics based identification of potential human hepatocarcinogenesis-associated cell cycle regulators: RHAMM as an example.

Yang CW, Su JY, Tsou AP, Chau GY, Liu HL, Chen CH, Chien CY, Chou CK.

Biochem Biophys Res Commun. 2005 May 6;330(2):489-97.

PMID:
15796909
17.

Lmo7 is an emerin-binding protein that regulates the transcription of emerin and many other muscle-relevant genes.

Holaska JM, Rais-Bahrami S, Wilson KL.

Hum Mol Genet. 2006 Dec 1;15(23):3459-72. Epub 2006 Oct 26.

PMID:
17067998
18.
19.

The THAP-zinc finger protein THAP1 regulates endothelial cell proliferation through modulation of pRB/E2F cell-cycle target genes.

Cayrol C, Lacroix C, Mathe C, Ecochard V, Ceribelli M, Loreau E, Lazar V, Dessen P, Mantovani R, Aguilar L, Girard JP.

Blood. 2007 Jan 15;109(2):584-94. Epub 2006 Sep 26.

20.

An analysis using DNA microarray of the time course of gene expression during syncytialization of a human placental cell line (BeWo).

Kudo Y, Boyd CA, Sargent IL, Redman CW, Lee JM, Freeman TC.

Placenta. 2004 Jul;25(6):479-88.

PMID:
15135230

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