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Items: 1 to 20 of 158

1.

PIRSF: family classification system at the Protein Information Resource.

Wu CH, Nikolskaya A, Huang H, Yeh LS, Natale DA, Vinayaka CR, Hu ZZ, Mazumder R, Kumar S, Kourtesis P, Ledley RS, Suzek BE, Arminski L, Chen Y, Zhang J, Cardenas JL, Chung S, Castro-Alvear J, Dinkov G, Barker WC.

Nucleic Acids Res. 2004 Jan 1;32(Database issue):D112-4.

2.

PIRSF family classification system for protein functional and evolutionary analysis.

Nikolskaya AN, Arighi CN, Huang H, Barker WC, Wu CH.

Evol Bioinform Online. 2007 Feb 10;2:197-209.

3.

Update on genome completion and annotations: Protein Information Resource.

Wu C, Nebert DW.

Hum Genomics. 2004 Mar;1(3):229-33. Review.

4.

The Protein Information Resource: an integrated public resource of functional annotation of proteins.

Wu CH, Huang H, Arminski L, Castro-Alvear J, Chen Y, Hu ZZ, Ledley RS, Lewis KC, Mewes HW, Orcutt BC, Suzek BE, Tsugita A, Vinayaka CR, Yeh LS, Zhang J, Barker WC.

Nucleic Acids Res. 2002 Jan 1;30(1):35-7.

5.

iProClass: an integrated database of protein family, function and structure information.

Huang H, Barker WC, Chen Y, Wu CH.

Nucleic Acids Res. 2003 Jan 1;31(1):390-2.

6.

iProLINK: an integrated protein resource for literature mining.

Hu ZZ, Mani I, Hermoso V, Liu H, Wu CH.

Comput Biol Chem. 2004 Dec;28(5-6):409-16.

PMID:
15556482
7.

iProClass: an integrated, comprehensive and annotated protein classification database.

Wu CH, Xiao C, Hou Z, Huang H, Barker WC.

Nucleic Acids Res. 2001 Jan 1;29(1):52-4.

8.

The Protein Information Resource.

Wu CH, Yeh LS, Huang H, Arminski L, Castro-Alvear J, Chen Y, Hu Z, Kourtesis P, Ledley RS, Suzek BE, Vinayaka CR, Zhang J, Barker WC.

Nucleic Acids Res. 2003 Jan 1;31(1):345-7.

9.

Protein family classification and functional annotation.

Wu CH, Huang H, Yeh LS, Barker WC.

Comput Biol Chem. 2003 Feb;27(1):37-47. Review.

PMID:
12798038
10.

Database of protein sequence alignments: PIR-ALN.

Srinivasarao GY, Yeh LS, Marzec CR, Orcutt BC, Barker WC, Pfeiffer F.

Nucleic Acids Res. 1999 Jan 1;27(1):284-5.

11.

Protein Information Resource: a community resource for expert annotation of protein data.

Barker WC, Garavelli JS, Hou Z, Huang H, Ledley RS, McGarvey PB, Mewes HW, Orcutt BC, Pfeiffer F, Tsugita A, Vinayaka CR, Xiao C, Yeh LS, Wu C.

Nucleic Acids Res. 2001 Jan 1;29(1):29-32.

12.

ProClass Protein Family Database.

Wu CH, Shivakumar S, Huang H.

Nucleic Acids Res. 1999 Jan 1;27(1):272-4.

13.

The PIR-International Protein Sequence Database.

Barker WC, Garavelli JS, McGarvey PB, Marzec CR, Orcutt BC, Srinivasarao GY, Yeh LS, Ledley RS, Mewes HW, Pfeiffer F, Tsugita A, Wu C.

Nucleic Acids Res. 1999 Jan 1;27(1):39-43.

14.
15.

The protein information resource (PIR).

Barker WC, Garavelli JS, Huang H, McGarvey PB, Orcutt BC, Srinivasarao GY, Xiao C, Yeh LS, Ledley RS, Janda JF, Pfeiffer F, Mewes HW, Tsugita A, Wu C.

Nucleic Acids Res. 2000 Jan 1;28(1):41-4.

16.

InterPro, progress and status in 2005.

Mulder NJ, Apweiler R, Attwood TK, Bairoch A, Bateman A, Binns D, Bradley P, Bork P, Bucher P, Cerutti L, Copley R, Courcelle E, Das U, Durbin R, Fleischmann W, Gough J, Haft D, Harte N, Hulo N, Kahn D, Kanapin A, Krestyaninova M, Lonsdale D, Lopez R, Letunic I, Madera M, Maslen J, McDowall J, Mitchell A, Nikolskaya AN, Orchard S, Pagni M, Ponting CP, Quevillon E, Selengut J, Sigrist CJ, Silventoinen V, Studholme DJ, Vaughan R, Wu CH.

Nucleic Acids Res. 2005 Jan 1;33(Database issue):D201-5.

17.

ProClass protein family database.

Huang H, Xiao C, Wu CH.

Nucleic Acids Res. 2000 Jan 1;28(1):273-6.

19.

ProFAT: a web-based tool for the functional annotation of protein sequences.

Bradshaw CR, Surendranath V, Habermann B.

BMC Bioinformatics. 2006 Oct 23;7:466.

20.

A Web-based classification system of DNA-binding protein families.

Karmirantzou M, Hamodrakas SJ.

Protein Eng. 2001 Jul;14(7):465-72.

PMID:
11522919

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