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Items: 1 to 20 of 463

1.

Building a BRIDGE for the integration of heterogeneous data from functional genomics into a platform for systems biology.

Goesmann A, Linke B, Rupp O, Krause L, Bartels D, Dondrup M, McHardy AC, Wilke A, Pühler A, Meyer F.

J Biotechnol. 2003 Dec 19;106(2-3):157-67.

PMID:
14651858
2.

EMMA: a platform for consistent storage and efficient analysis of microarray data.

Dondrup M, Goesmann A, Bartels D, Kalinowski J, Krause L, Linke B, Rupp O, Sczyrba A, Pühler A, Meyer F.

J Biotechnol. 2003 Dec 19;106(2-3):135-46.

PMID:
14651856
3.

IGG: A tool to integrate GeneChips for genetic studies.

Li MX, Jiang L, Ho SL, Song YQ, Sham PC.

Bioinformatics. 2007 Nov 15;23(22):3105-7. Epub 2007 Sep 14.

PMID:
17872914
4.

SSHSuite: an integrated software package for analysis of large-scale suppression subtractive hybridization data.

Weckx S, De Rijk P, Van Broeckhoven C, Del-Favero J.

Biotechniques. 2004 Jun;36(6):1043-5.

PMID:
15211756
5.

Omic space: coordinate-based integration and analysis of genomic phenomic interactions.

Toyoda T, Wada A.

Bioinformatics. 2004 Jul 22;20(11):1759-65. Epub 2004 Mar 22.

PMID:
15037505
6.

FIGENIX: intelligent automation of genomic annotation: expertise integration in a new software platform.

Gouret P, Vitiello V, Balandraud N, Gilles A, Pontarotti P, Danchin EG.

BMC Bioinformatics. 2005 Aug 5;6:198.

7.

Linking genotype to phenotype: the International Rice Information System (IRIS).

Bruskiewich RM, Cosico AB, Eusebio W, Portugal AM, Ramos LM, Reyes MT, Sallan MA, Ulat VJ, Wang X, McNally KL, Sackville Hamilton R, McLaren CG.

Bioinformatics. 2003;19 Suppl 1:i63-5.

PMID:
12855438
8.

Software packages for quantitative microarray-based gene expression analysis.

Dresen IM, Hüsing J, Kruse E, Boes T, Jöckel KH.

Curr Pharm Biotechnol. 2003 Dec;4(6):417-37. Review.

PMID:
14683435
9.

ROSY--a flexible and universal database and bioinformatics tool platform for Roseobacter related species.

Pommerenke C, Gabriel I, Bunk B, Münch R, Haddad I, Tielen P, Wagner-Döbler I, Jahn D.

In Silico Biol. 2008;8(2):177-86.

PMID:
18928204
10.

An XML message broker framework for exchange and integration of microarray data.

Tjandra D, Wong S, Shen W, Pulliam B, Yu E, Esserman L.

Bioinformatics. 2003 Sep 22;19(14):1844-5.

PMID:
14512357
11.

Intelligent client for integrating bioinformatics services.

Navas-Delgado I, Rojano-Muñoz Mdel M, Ramírez S, Pérez AJ, Andrés León E, Aldana-Montes JF, Trelles O.

Bioinformatics. 2006 Jan 1;22(1):106-11. Epub 2005 Oct 27.

PMID:
16257987
12.

GGM: efficient navigation and mining in distributed genomedical data.

Pierson JM, Gossa J, Wehrle P, Cardenas Y, Cahon S, El Samad M, Brunie L, Dhaenens C, Hameurlain A, Melab N, Miquel M, Morvan F, Talbi el-G, Tchounikine A.

IEEE Trans Nanobioscience. 2007 Jun;6(2):110-6.

PMID:
17695744
13.

Cross-species and cross-platform gene expression studies with the Bioconductor-compliant R package 'annotationTools'.

Kuhn A, Luthi-Carter R, Delorenzi M.

BMC Bioinformatics. 2008 Jan 17;9:26. doi: 10.1186/1471-2105-9-26.

14.

The Gaggle: an open-source software system for integrating bioinformatics software and data sources.

Shannon PT, Reiss DJ, Bonneau R, Baliga NS.

BMC Bioinformatics. 2006 Mar 28;7:176.

15.

Bioinformatics support for high-throughput proteomics.

Wilke A, Rückert C, Bartels D, Dondrup M, Goesmann A, Hüser AT, Kespohl S, Linke B, Mahne M, McHardy A, Pühler A, Meyer F.

J Biotechnol. 2003 Dec 19;106(2-3):147-56.

PMID:
14651857
16.

Data integration and genomic medicine.

Louie B, Mork P, Martin-Sanchez F, Halevy A, Tarczy-Hornoch P.

J Biomed Inform. 2007 Feb;40(1):5-16. Epub 2006 Mar 9. Review.

17.

Clustering of diverse genomic data using information fusion.

Kasturi J, Acharya R.

Bioinformatics. 2005 Feb 15;21(4):423-9. Epub 2004 Dec 17.

PMID:
15608052
18.

TMABoost: an integrated system for comprehensive management of tissue microarray data.

Demichelis F, Sboner A, Barbareschi M, Dell'Anna R.

IEEE Trans Inf Technol Biomed. 2006 Jan;10(1):19-27.

PMID:
16445246
19.

Evaluation of ontology development tools for bioinformatics.

Lambrix P, Habbouche M, Pérez M.

Bioinformatics. 2003 Aug 12;19(12):1564-71.

PMID:
12912838
20.

Light-weight integration of molecular biological databases.

Philippi S.

Bioinformatics. 2004 Jan 1;20(1):51-7.

PMID:
14693808

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