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Items: 1 to 20 of 424

1.

Naturally-occurring modification restricts the anticodon domain conformational space of tRNA(Phe).

Stuart JW, Koshlap KM, Guenther R, Agris PF.

J Mol Biol. 2003 Dec 12;334(5):901-18.

PMID:
14643656
2.

Functional anticodon architecture of human tRNALys3 includes disruption of intraloop hydrogen bonding by the naturally occurring amino acid modification, t6A.

Stuart JW, Gdaniec Z, Guenther R, Marszalek M, Sochacka E, Malkiewicz A, Agris PF.

Biochemistry. 2000 Nov 7;39(44):13396-404.

PMID:
11063577
3.
4.

Aminoacyl-tRNA synthetase and U54 methyltransferase recognize conformations of the yeast tRNA(Phe) anticodon and T stem/loop domain.

Guenther RH, Bakal RS, Forrest B, Chen Y, Sengupta R, Nawrot B, Sochacka E, Jankowska J, Kraszewski A, Malkiewicz A, et al.

Biochimie. 1994;76(12):1143-51.

PMID:
7748949
5.

Anticodon domain modifications contribute order to tRNA for ribosome-mediated codon binding.

Vendeix FA, Dziergowska A, Gustilo EM, Graham WD, Sproat B, Malkiewicz A, Agris PF.

Biochemistry. 2008 Jun 10;47(23):6117-29. doi: 10.1021/bi702356j.

PMID:
18473483
6.

Hypermodified nucleosides in the anticodon of tRNALys stabilize a canonical U-turn structure.

Sundaram M, Durant PC, Davis DR.

Biochemistry. 2000 Oct 17;39(41):12575-84.

PMID:
11027137
7.

Role of modified nucleosides of yeast tRNA(Phe) in ribosomal binding.

Ashraf SS, Guenther RH, Ansari G, Malkiewicz A, Sochacka E, Agris PF.

Cell Biochem Biophys. 2000;33(3):241-52.

PMID:
11325044
8.
9.

Solution conformations of unmodified and A(37)N(6)-dimethylallyl modified anticodon stem-loops of Escherichia coli tRNA(Phe).

Cabello-Villegas J, Winkler ME, Nikonowicz EP.

J Mol Biol. 2002 Jun 21;319(5):1015-34.

PMID:
12079344
11.

Metal ion stabilization of the U-turn of the A37 N6-dimethylallyl-modified anticodon stem-loop of Escherichia coli tRNAPhe.

Cabello-Villegas J, Tworowska I, Nikonowicz EP.

Biochemistry. 2004 Jan 13;43(1):55-66.

PMID:
14705931
12.

5-Methylcytidine is required for cooperative binding of Mg2+ and a conformational transition at the anticodon stem-loop of yeast phenylalanine tRNA.

Chen Y, Sierzputowska-Gracz H, Guenther R, Everett K, Agris PF.

Biochemistry. 1993 Sep 28;32(38):10249-53.

PMID:
8399153
13.

Thermodynamic contribution of nucleoside modifications to yeast tRNA(Phe) anticodon stem loop analogs.

Agris PF, Guenther R, Sochacka E, Newman W, Czerwińska G, Liu G, Ye W, Malkiewicz A.

Acta Biochim Pol. 1999;46(1):163-72.

14.

E. coli glutamyl-tRNA synthetase is inhibited by anticodon stem-loop domains and a minihelix.

Gustilo EM, Dubois DY, Lapointe J, Agris PF.

RNA Biol. 2007 Jul;4(2):85-92.

PMID:
17671438
15.

Modifications modulate anticodon loop dynamics and codon recognition of E. coli tRNA(Arg1,2).

Cantara WA, Bilbille Y, Kim J, Kaiser R, Leszczyńska G, Malkiewicz A, Agris PF.

J Mol Biol. 2012 Mar 2;416(4):579-97. doi: 10.1016/j.jmb.2011.12.054.

PMID:
22240457
16.

A distinctive RNA fold: the solution structure of an analogue of the yeast tRNAPhe T Psi C domain.

Koshlap KM, Guenther R, Sochacka E, Malkiewicz A, Agris PF.

Biochemistry. 1999 Jul 6;38(27):8647-56.

PMID:
10393540
17.
18.

tRNA's wobble decoding of the genome: 40 years of modification.

Agris PF, Vendeix FA, Graham WD.

J Mol Biol. 2007 Feb 9;366(1):1-13. Review.

PMID:
17187822
19.

Modified nucleoside dependent Watson-Crick and wobble codon binding by tRNALysUUU species.

Yarian C, Marszalek M, Sochacka E, Malkiewicz A, Guenther R, Miskiewicz A, Agris PF.

Biochemistry. 2000 Nov 7;39(44):13390-5.

PMID:
11063576
20.

Using capillary electrophoresis to study methylation effect on RNA-peptide interaction.

Mucha P, Szyk A, Rekowski P, Agris PF.

Acta Biochim Pol. 2003;50(3):857-64.

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