Format
Sort by
Items per page

Send to

Choose Destination

Links from PubMed

Items: 1 to 20 of 237

1.

SWISS-MODEL: An automated protein homology-modeling server.

Schwede T, Kopp J, Guex N, Peitsch MC.

Nucleic Acids Res. 2003 Jul 1;31(13):3381-5.

2.

The SWISS-MODEL workspace: a web-based environment for protein structure homology modelling.

Arnold K, Bordoli L, Kopp J, Schwede T.

Bioinformatics. 2006 Jan 15;22(2):195-201. Epub 2005 Nov 13.

PMID:
16301204
3.

The SWISS-MODEL Repository: new features and functionalities.

Kopp J, Schwede T.

Nucleic Acids Res. 2006 Jan 1;34(Database issue):D315-8.

4.

ExPASy: The proteomics server for in-depth protein knowledge and analysis.

Gasteiger E, Gattiker A, Hoogland C, Ivanyi I, Appel RD, Bairoch A.

Nucleic Acids Res. 2003 Jul 1;31(13):3784-8.

5.

Parmodel: a web server for automated comparative modeling of proteins.

Uchôa HB, Jorge GE, Freitas Da Silveira NJ, Camera JC Jr, Canduri F, De Azevedo WF Jr.

Biochem Biophys Res Commun. 2004 Dec 24;325(4):1481-6.

PMID:
15555595
6.

SWISS-MODEL and the Swiss-PdbViewer: an environment for comparative protein modeling.

Guex N, Peitsch MC.

Electrophoresis. 1997 Dec;18(15):2714-23.

PMID:
9504803
7.

The SWISS-MODEL Repository of annotated three-dimensional protein structure homology models.

Kopp J, Schwede T.

Nucleic Acids Res. 2004 Jan 1;32(Database issue):D230-4.

8.

COLORADO3D, a web server for the visual analysis of protein structures.

Sasin JM, Bujnicki JM.

Nucleic Acids Res. 2004 Jul 1;32(Web Server issue):W586-9.

9.

Automated comparative protein structure modeling with SWISS-MODEL and Swiss-PdbViewer: a historical perspective.

Guex N, Peitsch MC, Schwede T.

Electrophoresis. 2009 Jun;30 Suppl 1:S162-73. doi: 10.1002/elps.200900140.

PMID:
19517507
10.

SWISS-MODEL: modelling protein tertiary and quaternary structure using evolutionary information.

Biasini M, Bienert S, Waterhouse A, Arnold K, Studer G, Schmidt T, Kiefer F, Gallo Cassarino T, Bertoni M, Bordoli L, Schwede T.

Nucleic Acids Res. 2014 Jul;42(Web Server issue):W252-8. doi: 10.1093/nar/gku340. Epub 2014 Apr 29.

11.

CPHmodels-3.0--remote homology modeling using structure-guided sequence profiles.

Nielsen M, Lundegaard C, Lund O, Petersen TN.

Nucleic Acids Res. 2010 Jul;38(Web Server issue):W576-81. doi: 10.1093/nar/gkq535. Epub 2010 Jun 11.

12.

@TOME-2: a new pipeline for comparative modeling of protein-ligand complexes.

Pons JL, Labesse G.

Nucleic Acids Res. 2009 Jul;37(Web Server issue):W485-91. doi: 10.1093/nar/gkp368. Epub 2009 May 13.

13.

HOMCOS: a server to predict interacting protein pairs and interacting sites by homology modeling of complex structures.

Fukuhara N, Kawabata T.

Nucleic Acids Res. 2008 Jul 1;36(Web Server issue):W185-9. doi: 10.1093/nar/gkn218. Epub 2008 Apr 28.

14.

The SWISS-MODEL Repository and associated resources.

Kiefer F, Arnold K, Künzli M, Bordoli L, Schwede T.

Nucleic Acids Res. 2009 Jan;37(Database issue):D387-92. doi: 10.1093/nar/gkn750. Epub 2008 Oct 18.

15.

MollDE: a homology modeling framework you can click with.

Canutescu AA, Dunbrack RL Jr.

Bioinformatics. 2005 Jun 15;21(12):2914-6. Epub 2005 Apr 21.

PMID:
15845657
16.

Integrated databanks access and sequence/structure analysis services at the PBIL.

Perrière G, Combet C, Penel S, Blanchet C, Thioulouse J, Geourjon C, Grassot J, Charavay C, Gouy M, Duret L, Deléage G.

Nucleic Acids Res. 2003 Jul 1;31(13):3393-9.

17.

The ProDom database of protein domain families: more emphasis on 3D.

Bru C, Courcelle E, Carrère S, Beausse Y, Dalmar S, Kahn D.

Nucleic Acids Res. 2005 Jan 1;33(Database issue):D212-5.

18.

The ProDom database of protein domain families.

Corpet F, Gouzy J, Kahn D.

Nucleic Acids Res. 1998 Jan 1;26(1):323-6.

19.

ModeRNA server: an online tool for modeling RNA 3D structures.

Rother M, Milanowska K, Puton T, Jeleniewicz J, Rother K, Bujnicki JM.

Bioinformatics. 2011 Sep 1;27(17):2441-2. doi: 10.1093/bioinformatics/btr400. Epub 2011 Jul 4.

PMID:
21727140
20.

I-TASSER server for protein 3D structure prediction.

Zhang Y.

BMC Bioinformatics. 2008 Jan 23;9:40. doi: 10.1186/1471-2105-9-40.

Supplemental Content

Support Center