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Items: 1 to 20 of 105

1.

Comparative genomics of thiamin biosynthesis in procaryotes. New genes and regulatory mechanisms.

Rodionov DA, Vitreschak AG, Mironov AA, Gelfand MS.

J Biol Chem. 2002 Dec 13;277(50):48949-59.

2.

Regulation of the vitamin B12 metabolism and transport in bacteria by a conserved RNA structural element.

Vitreschak AG, Rodionov DA, Mironov AA, Gelfand MS.

RNA. 2003 Sep;9(9):1084-97.

3.
4.

Regulation of lysine biosynthesis and transport genes in bacteria: yet another RNA riboswitch?

Rodionov DA, Vitreschak AG, Mironov AA, Gelfand MS.

Nucleic Acids Res. 2003 Dec 1;31(23):6748-57.

5.

Sensing small molecules by nascent RNA: a mechanism to control transcription in bacteria.

Mironov AS, Gusarov I, Rafikov R, Lopez LE, Shatalin K, Kreneva RA, Perumov DA, Nudler E.

Cell. 2002 Nov 27;111(5):747-56.

6.

Regulation of riboflavin biosynthesis and transport genes in bacteria by transcriptional and translational attenuation.

Vitreschak AG, Rodionov DA, Mironov AA, Gelfand MS.

Nucleic Acids Res. 2002 Jul 15;30(14):3141-51.

7.

An in silico analysis of T-box regulated genes and T-box evolution in prokaryotes, with emphasis on prediction of substrate specificity of transporters.

Wels M, Groot Kormelink T, Kleerebezem M, Siezen RJ, Francke C.

BMC Genomics. 2008 Jul 14;9:330. doi: 10.1186/1471-2164-9-330.

8.

A conserved RNA structure (thi box) is involved in regulation of thiamin biosynthetic gene expression in bacteria.

Miranda-Ríos J, Navarro M, Soberón M.

Proc Natl Acad Sci U S A. 2001 Aug 14;98(17):9736-41.

9.

Attenuation regulation of amino acid biosynthetic operons in proteobacteria: comparative genomics analysis.

Vitreschak AG, Lyubetskaya EV, Shirshin MA, Gelfand MS, Lyubetsky VA.

FEMS Microbiol Lett. 2004 May 15;234(2):357-70.

10.

Genetic regulation mediated by thiamin pyrophosphate-binding motif in Saccharomyces cerevisiae.

Nosaka K, Onozuka M, Konno H, Kawasaki Y, Nishimura H, Sano M, Akaji K.

Mol Microbiol. 2005 Oct;58(2):467-79.

11.

[Computer analysis of regulatory signals in complete bacterial genomes. Translation initiation of ribosomal protein operons].

Vitreshchak A, Bansal AK, Titov II, Gel'fand MS.

Biofizika. 1999 Jul-Aug;44(4):601-10. Russian.

PMID:
10544808
12.

A comparative analysis of ABC transporters in complete microbial genomes.

Tomii K, Kanehisa M.

Genome Res. 1998 Oct;8(10):1048-59.

13.

The THI-box riboswitch, or how RNA binds thiamin pyrophosphate.

Miranda-Ríos J.

Structure. 2007 Mar;15(3):259-65. Review.

14.
15.

The structural and biochemical foundations of thiamin biosynthesis.

Jurgenson CT, Begley TP, Ealick SE.

Annu Rev Biochem. 2009;78:569-603. doi: 10.1146/annurev.biochem.78.072407.102340. Review.

PMID:
19348578
16.

The genes and enzymes involved in the biosynthesis of thiamin and thiamin diphosphate in yeasts.

Kowalska E, Kozik A.

Cell Mol Biol Lett. 2008;13(2):271-82. Review.

PMID:
18161008
17.

Conservation of the biotin regulon and the BirA regulatory signal in Eubacteria and Archaea.

Rodionov DA, Mironov AA, Gelfand MS.

Genome Res. 2002 Oct;12(10):1507-16.

18.

Regulation of biosynthesis and transport of aromatic amino acids in low-GC Gram-positive bacteria.

Panina EM, Vitreschak AG, Mironov AA, Gelfand MS.

FEMS Microbiol Lett. 2003 May 28;222(2):211-20.

19.

[Search for alternative secondary structures of RNA, regulating expression of bacterial genes].

Liubetskaia EV, Leont'ev LA, Gel'fand MS, Liubetskiĭ VA.

Mol Biol (Mosk). 2003 Sep-Oct;37(5):834-42. Russian.

PMID:
14593920
20.

Comparative genomics of the methionine metabolism in Gram-positive bacteria: a variety of regulatory systems.

Rodionov DA, Vitreschak AG, Mironov AA, Gelfand MS.

Nucleic Acids Res. 2004 Jun 23;32(11):3340-53.

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