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Items: 1 to 20 of 119

1.

Functional organization of the yeast proteome by systematic analysis of protein complexes.

Gavin AC, Bösche M, Krause R, Grandi P, Marzioch M, Bauer A, Schultz J, Rick JM, Michon AM, Cruciat CM, Remor M, Höfert C, Schelder M, Brajenovic M, Ruffner H, Merino A, Klein K, Hudak M, Dickson D, Rudi T, Gnau V, Bauch A, Bastuck S, Huhse B, Leutwein C, Heurtier MA, Copley RR, Edelmann A, Querfurth E, Rybin V, Drewes G, Raida M, Bouwmeester T, Bork P, Seraphin B, Kuster B, Neubauer G, Superti-Furga G.

Nature. 2002 Jan 10;415(6868):141-7.

PMID:
11805826
2.

Global landscape of protein complexes in the yeast Saccharomyces cerevisiae.

Krogan NJ, Cagney G, Yu H, Zhong G, Guo X, Ignatchenko A, Li J, Pu S, Datta N, Tikuisis AP, Punna T, Peregrín-Alvarez JM, Shales M, Zhang X, Davey M, Robinson MD, Paccanaro A, Bray JE, Sheung A, Beattie B, Richards DP, Canadien V, Lalev A, Mena F, Wong P, Starostine A, Canete MM, Vlasblom J, Wu S, Orsi C, Collins SR, Chandran S, Haw R, Rilstone JJ, Gandi K, Thompson NJ, Musso G, St Onge P, Ghanny S, Lam MH, Butland G, Altaf-Ul AM, Kanaya S, Shilatifard A, O'Shea E, Weissman JS, Ingles CJ, Hughes TR, Parkinson J, Gerstein M, Wodak SJ, Emili A, Greenblatt JF.

Nature. 2006 Mar 30;440(7084):637-43.

PMID:
16554755
3.

An efficient protein complex purification method for functional proteomics in higher eukaryotes.

Forler D, Köcher T, Rode M, Gentzel M, Izaurralde E, Wilm M.

Nat Biotechnol. 2003 Jan;21(1):89-92.

PMID:
12483225
4.

Proteome survey reveals modularity of the yeast cell machinery.

Gavin AC, Aloy P, Grandi P, Krause R, Boesche M, Marzioch M, Rau C, Jensen LJ, Bastuck S, Dümpelfeld B, Edelmann A, Heurtier MA, Hoffman V, Hoefert C, Klein K, Hudak M, Michon AM, Schelder M, Schirle M, Remor M, Rudi T, Hooper S, Bauer A, Bouwmeester T, Casari G, Drewes G, Neubauer G, Rick JM, Kuster B, Bork P, Russell RB, Superti-Furga G.

Nature. 2006 Mar 30;440(7084):631-6.

PMID:
16429126
5.
6.

Deciphering protein complexes and protein interaction networks by tandem affinity purification and mass spectrometry: analytical perspective.

Shevchenko A, Schaft D, Roguev A, Pijnappel WW, Stewart AF, Shevchenko A.

Mol Cell Proteomics. 2002 Mar;1(3):204-12.

7.

Identification and characterization of protein subcomplexes in yeast.

Hollunder J, Beyer A, Wilhelm T.

Proteomics. 2005 May;5(8):2082-9.

PMID:
15832363
8.

Analyzing yeast protein-protein interaction data obtained from different sources.

Bader GD, Hogue CW.

Nat Biotechnol. 2002 Oct;20(10):991-7.

PMID:
12355115
9.

Tandem affinity purification and identification of protein complex components.

Gould KL, Ren L, Feoktistova AS, Jennings JL, Link AJ.

Methods. 2004 Jul;33(3):239-44.

PMID:
15157891
10.

A comparative analysis of an orthologous proteomic environment in the yeasts Saccharomyces cerevisiae and Schizosaccharomyces pombe.

Roguev A, Shevchenko A, Schaft D, Thomas H, Stewart AF, Shevchenko A.

Mol Cell Proteomics. 2004 Feb;3(2):125-32.

11.
12.

Systematic characterization of the protein interaction network and protein complexes in Saccharomyces cerevisiae using tandem affinity purification and mass spectrometry.

Babu M, Krogan NJ, Awrey DE, Emili A, Greenblatt JF.

Methods Mol Biol. 2009;548:187-207. doi: 10.1007/978-1-59745-540-4_11.

PMID:
19521826
13.

Genetic basis of proteome variation in yeast.

Foss EJ, Radulovic D, Shaffer SA, Ruderfer DM, Bedalov A, Goodlett DR, Kruglyak L.

Nat Genet. 2007 Nov;39(11):1369-75.

PMID:
17952072
14.

Subunit architecture of multimeric complexes isolated directly from cells.

Hernández H, Dziembowski A, Taverner T, Séraphin B, Robinson CV.

EMBO Rep. 2006 Jun;7(6):605-10.

15.

Global analysis of protein localization in budding yeast.

Huh WK, Falvo JV, Gerke LC, Carroll AS, Howson RW, Weissman JS, O'Shea EK.

Nature. 2003 Oct 16;425(6959):686-91.

16.

Sequential peptide affinity purification system for the systematic isolation and identification of protein complexes from Escherichia coli.

Babu M, Butland G, Pogoutse O, Li J, Greenblatt JF, Emili A.

Methods Mol Biol. 2009;564:373-400. doi: 10.1007/978-1-60761-157-8_22.

PMID:
19544035
17.

Applicability of tandem affinity purification MudPIT to pathway proteomics in yeast.

Graumann J, Dunipace LA, Seol JH, McDonald WH, Yates JR 3rd, Wold BJ, Deshaies RJ.

Mol Cell Proteomics. 2004 Mar;3(3):226-37.

18.

Mass spectrometry-based methods for phosphorylation site mapping of hyperphosphorylated proteins applied to Net1, a regulator of exit from mitosis in yeast.

Loughrey Chen S, Huddleston MJ, Shou W, Deshaies RJ, Annan RS, Carr SA.

Mol Cell Proteomics. 2002 Mar;1(3):186-96.

19.

The identification of protein-protein interactions of the nuclear pore complex of Saccharomyces cerevisiae using high throughput matrix-assisted laser desorption ionization time-of-flight tandem mass spectrometry.

Huang L, Baldwin MA, Maltby DA, Medzihradszky KF, Baker PR, Allen N, Rexach M, Edmondson RD, Campbell J, Juhasz P, Martin SA, Vestal ML, Burlingame AL.

Mol Cell Proteomics. 2002 Jun;1(6):434-50.

20.

Mapping multiprotein complexes by affinity purification and mass spectrometry.

Collins MO, Choudhary JS.

Curr Opin Biotechnol. 2008 Aug;19(4):324-30. doi: 10.1016/j.copbio.2008.06.002. Review.

PMID:
18598764
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