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Items: 1 to 20 of 122

1.

Crystal structure of a repair enzyme of oxidatively damaged DNA, MutM (Fpg), from an extreme thermophile, Thermus thermophilus HB8.

Sugahara M, Mikawa T, Kumasaka T, Yamamoto M, Kato R, Fukuyama K, Inoue Y, Kuramitsu S.

EMBO J. 2000 Aug 1;19(15):3857-69.

2.

Thermostable repair enzyme for oxidative DNA damage from extremely thermophilic bacterium, Thermus thermophilus HB8.

Mikawa T, Kato R, Sugahara M, Kuramitsu S.

Nucleic Acids Res. 1998 Feb 15;26(4):903-10. Erratum in: Nucleic Acids Res 1998 Apr 1;26(7):following 1855.

3.
4.

Crystallization and preliminary X-ray crystallographic studies of Thermus thermophilus HB8 MutM protein involved in repairs of oxidative DNA damage.

Sugahara M, Mikawa T, Kato R, Fukuyama K, Kumasaka T, Yamamoto M, Inoue Y, Kuramitsu S.

J Biochem. 2000 Jan;127(1):9-11.

5.

Crystal structure of the Lactococcus lactis formamidopyrimidine-DNA glycosylase bound to an abasic site analogue-containing DNA.

Serre L, Pereira de Jésus K, Boiteux S, Zelwer C, Castaing B.

EMBO J. 2002 Jun 17;21(12):2854-65.

6.

Repair of oxidized purines and damaged pyrimidines by E. coli Fpg protein: different roles of proline 2 and lysine 57 residues.

Saparbaev M, Sidorkina OM, Jurado J, Privezentzev CV, Greenberg MM, Laval J.

Environ Mol Mutagen. 2002;39(1):10-7.

PMID:
11813291
7.

Structure of formamidopyrimidine-DNA glycosylase covalently complexed to DNA.

Gilboa R, Zharkov DO, Golan G, Fernandes AS, Gerchman SE, Matz E, Kycia JH, Grollman AP, Shoham G.

J Biol Chem. 2002 May 31;277(22):19811-6. Epub 2002 Mar 23.

8.

Crystal structure of a family 4 uracil-DNA glycosylase from Thermus thermophilus HB8.

Hoseki J, Okamoto A, Masui R, Shibata T, Inoue Y, Yokoyama S, Kuramitsu S.

J Mol Biol. 2003 Oct 24;333(3):515-26.

PMID:
14556741
9.

Function of the zinc finger in Escherichia coli Fpg protein.

Tchou J, Michaels ML, Miller JH, Grollman AP.

J Biol Chem. 1993 Dec 15;268(35):26738-44.

10.

Structural investigation of a viral ortholog of human NEIL2/3 DNA glycosylases.

Prakash A, Eckenroth BE, Averill AM, Imamura K, Wallace SS, Doublié S.

DNA Repair (Amst). 2013 Dec;12(12):1062-71. doi: 10.1016/j.dnarep.2013.09.004. Epub 2013 Oct 10.

11.

Molecular cloning of AtMMH, an Arabidopsis thaliana ortholog of the Escherichia coli mutM gene, and analysis of functional domains of its product.

Ohtsubo T, Matsuda O, Iba K, Terashima I, Sekiguchi M, Nakabeppu Y.

Mol Gen Genet. 1998 Oct;259(6):577-90.

PMID:
9819050
12.

Repair of oxidative DNA damage: mechanisms and functions.

Lu AL, Li X, Gu Y, Wright PM, Chang DY.

Cell Biochem Biophys. 2001;35(2):141-70. Review.

PMID:
11892789
13.

Structural comparison of AP endonucleases from the exonuclease III family reveals new amino acid residues in human AP endonuclease 1 that are involved in incision of damaged DNA.

Redrejo-Rodríguez M, Vigouroux A, Mursalimov A, Grin I, Alili D, Koshenov Z, Akishev Z, Maksimenko A, Bissenbaev AK, Matkarimov BT, Saparbaev M, Ishchenko AA, Moréra S.

Biochimie. 2016 Sep-Oct;128-129:20-33. doi: 10.1016/j.biochi.2016.06.011. Epub 2016 Jun 22.

14.

Structural and biochemical studies of a plant formamidopyrimidine-DNA glycosylase reveal why eukaryotic Fpg glycosylases do not excise 8-oxoguanine.

Duclos S, Aller P, Jaruga P, Dizdaroglu M, Wallace SS, Doublié S.

DNA Repair (Amst). 2012 Sep 1;11(9):714-25. doi: 10.1016/j.dnarep.2012.06.004. Epub 2012 Jul 11.

15.

Crystal structure of a novel zinc-binding ATP sulfurylase from Thermus thermophilus HB8.

Taguchi Y, Sugishima M, Fukuyama K.

Biochemistry. 2004 Apr 13;43(14):4111-8.

PMID:
15065853
16.

Human Nei-like protein NEIL3 has AP lyase activity specific for single-stranded DNA and confers oxidative stress resistance in Escherichia coli mutant.

Takao M, Oohata Y, Kitadokoro K, Kobayashi K, Iwai S, Yasui A, Yonei S, Zhang QM.

Genes Cells. 2009 Feb;14(2):261-70. doi: 10.1111/j.1365-2443.2008.01271.x. Epub 2008 Jan 15.

17.

Identification and characterization of a human DNA glycosylase for repair of modified bases in oxidatively damaged DNA.

Hazra TK, Izumi T, Boldogh I, Imhoff B, Kow YW, Jaruga P, Dizdaroglu M, Mitra S.

Proc Natl Acad Sci U S A. 2002 Mar 19;99(6):3523-8.

18.

Energetics of lesion recognition by a DNA repair protein: thermodynamic characterization of formamidopyrimidine-glycosylase (Fpg) interactions with damaged DNA duplexes.

Minetti CA, Remeta DP, Zharkov DO, Plum GE, Johnson F, Grollman AP, Breslauer KJ.

J Mol Biol. 2003 May 16;328(5):1047-60.

PMID:
12729740
20.

Potential double-flipping mechanism by E. coli MutY.

House PG, Volk DE, Thiviyanathan V, Manuel RC, Luxon BA, Gorenstein DG, Lloyd RS.

Prog Nucleic Acid Res Mol Biol. 2001;68:349-64. Review.

PMID:
11554310

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