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Items: 1 to 20 of 8326


Assessing microscope image focus quality with deep learning.

Yang SJ, Berndl M, Michael Ando D, Barch M, Narayanaswamy A, Christiansen E, Hoyer S, Roat C, Hung J, Rueden CT, Shankar A, Finkbeiner S, Nelson P.

BMC Bioinformatics. 2018 Mar 15;19(1):77. doi: 10.1186/s12859-018-2087-4.


An integrated approach to infer cross-talks between intracellular protein transport and signaling pathways.

Tripathi KP, Piccirillo M, Guarracino MR.

BMC Bioinformatics. 2018 Mar 8;19(Suppl 2):58. doi: 10.1186/s12859-018-2036-2.


Discriminate the response of Acute Myeloid Leukemia patients to treatment by using proteomics data and Answer Set Programming.

Chebouba L, Miannay B, Boughaci D, Guziolowski C.

BMC Bioinformatics. 2018 Mar 8;19(Suppl 2):59. doi: 10.1186/s12859-018-2034-4.


Ensemble of rankers for efficient gene signature extraction in smoke exposure classification.

Giordano M, Tripathi KP, Guarracino MR.

BMC Bioinformatics. 2018 Mar 8;19(Suppl 2):48. doi: 10.1186/s12859-018-2035-3.


Phylogenetic convolutional neural networks in metagenomics.

Fioravanti D, Giarratano Y, Maggio V, Agostinelli C, Chierici M, Jurman G, Furlanello C.

BMC Bioinformatics. 2018 Mar 8;19(Suppl 2):49. doi: 10.1186/s12859-018-2033-5.


Watchdog - a workflow management system for the distributed analysis of large-scale experimental data.

Kluge M, Friedel CC.

BMC Bioinformatics. 2018 Mar 13;19(1):97. doi: 10.1186/s12859-018-2107-4.


Inferring RNA sequence preferences for poorly studied RNA-binding proteins based on co-evolution.

Yang S, Wang J, Ng RT.

BMC Bioinformatics. 2018 Mar 12;19(1):96. doi: 10.1186/s12859-018-2091-8.


Comparative assessment of strategies to identify similar ligand-binding pockets in proteins.

Govindaraj RG, Brylinski M.

BMC Bioinformatics. 2018 Mar 9;19(1):91. doi: 10.1186/s12859-018-2109-2.


Fast and efficient short read mapping based on a succinct hash index.

Zhang H, Chan Y, Fan K, Schmidt B, Liu W.

BMC Bioinformatics. 2018 Mar 9;19(1):92. doi: 10.1186/s12859-018-2094-5.


HT-eQTL: integrative expression quantitative trait loci analysis in a large number of human tissues.

Li G, Jima D, Wright FA, Nobel AB.

BMC Bioinformatics. 2018 Mar 9;19(1):95. doi: 10.1186/s12859-018-2088-3.


An interpretable framework for clustering single-cell RNA-Seq datasets.

Zhang JM, Fan J, Fan HC, Rosenfeld D, Tse DN.

BMC Bioinformatics. 2018 Mar 9;19(1):93. doi: 10.1186/s12859-018-2092-7.


Textpresso Central: a customizable platform for searching, text mining, viewing, and curating biomedical literature.

Müller HM, Van Auken KM, Li Y, Sternberg PW.

BMC Bioinformatics. 2018 Mar 9;19(1):94. doi: 10.1186/s12859-018-2103-8.


An information-theoretic approach to the modeling and analysis of whole-genome bisulfite sequencing data.

Jenkinson G, Abante J, Feinberg AP, Goutsias J.

BMC Bioinformatics. 2018 Mar 7;19(1):87. doi: 10.1186/s12859-018-2086-5.


Comparison of discriminative motif optimization using matrix and DNA shape-based models.

Ruan S, Stormo GD.

BMC Bioinformatics. 2018 Mar 6;19(1):86. doi: 10.1186/s12859-018-2104-7.


Building protein-protein interaction networks for Leishmania species through protein structural information.

Dos Santos Vasconcelos CR, de Lima Campos T, Rezende AM.

BMC Bioinformatics. 2018 Mar 6;19(1):85. doi: 10.1186/s12859-018-2105-6.


IntLIM: integration using linear models of metabolomics and gene expression data.

Siddiqui JK, Baskin E, Liu M, Cantemir-Stone CZ, Zhang B, Bonneville R, McElroy JP, Coombes KR, Mathé EA.

BMC Bioinformatics. 2018 Mar 5;19(1):81. doi: 10.1186/s12859-018-2085-6.


Alignment-free clustering of large data sets of unannotated protein conserved regions using minhashing.

Abnousi A, Broschat SL, Kalyanaraman A.

BMC Bioinformatics. 2018 Mar 5;19(1):83. doi: 10.1186/s12859-018-2080-y.


ToxPi Graphical User Interface 2.0: Dynamic exploration, visualization, and sharing of integrated data models.

Marvel SW, To K, Grimm FA, Wright FA, Rusyn I, Reif DM.

BMC Bioinformatics. 2018 Mar 5;19(1):80. doi: 10.1186/s12859-018-2089-2.


Characterization and visualization of RNA secondary structure Boltzmann ensemble via information theory.

Lin L, McKerrow WH, Richards B, Phonsom C, Lawrence CE.

BMC Bioinformatics. 2018 Mar 5;19(1):82. doi: 10.1186/s12859-018-2078-5.

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