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Items: 1 to 20 of 1101

1.

The genetic architecture of heterochrony as a quantitative trait: lessons from a computational model.

Sun L, Sang M, Zheng C, Wang D, Shi H, Liu K, Guo Y, Cheng T, Zhang Q, Wu R.

Brief Bioinform. 2017 Jun 22. doi: 10.1093/bib/bbx075. [Epub ahead of print] No abstract available.

PMID:
28645151
2.

Nanopore sequencing data analysis: state of the art, applications and challenges.

Magi A, Semeraro R, Mingrino A, Giusti B, D'Aurizio R.

Brief Bioinform. 2017 Jun 16. doi: 10.1093/bib/bbx062. [Epub ahead of print]

PMID:
28637243
3.

Biomedical text mining for research rigor and integrity: tasks, challenges, directions.

Kilicoglu H.

Brief Bioinform. 2017 Jun 13. doi: 10.1093/bib/bbx057. [Epub ahead of print]

PMID:
28633401
4.

Investigating microRNA-mediated regulation of the nascent nuclear transcripts in plants: a bioinformatics workflow.

Yu D, Tang Z, Shao C, Ma X, Xiang T, Fan Z, Wang H, Meng Y.

Brief Bioinform. 2017 Jun 14. doi: 10.1093/bib/bbx069. [Epub ahead of print]

PMID:
28633390
5.

Recent computational developments on CLIP-seq data analysis and microRNA targeting implications.

Bottini S, Pratella D, Grandjean V, Repetto E, Trabucchi M.

Brief Bioinform. 2017 Jun 12. doi: 10.1093/bib/bbx063. [Epub ahead of print]

PMID:
28605404
6.

Power and sample size calculations for high-throughput sequencing-based experiments.

Li CI, Samuels DC, Zhao YY, Shyr Y, Guo Y.

Brief Bioinform. 2017 Jun 9. doi: 10.1093/bib/bbx061. [Epub ahead of print]

PMID:
28605403
7.

The genetic architecture of heterochronsy as a quantitative trait: lessons from a computational model.

Sun L, Sang M, Zheng C, Wang D, Shi H, Liu K, Guo Y, Cheng T, Zhang Q, Wu R.

Brief Bioinform. 2017 May 30. doi: 10.1093/bib/bbx056. [Epub ahead of print]

PMID:
28575183
8.

Dynamic-BM: multispecies Dynamic BodyMap database from temporal RNA-seq data.

Cui Y, Chen X, Niu Y, Wang D, Luo H, Fan Z, Wang D, Wu W, Teng X, He S, Luo J, Chen R.

Brief Bioinform. 2017 Jun 1. doi: 10.1093/bib/bbx059. [Epub ahead of print]

PMID:
28575155
9.

A comprehensive evaluation of popular proteomics software workflows for label-free proteome quantification and imputation.

Välikangas T, Suomi T, Elo LL.

Brief Bioinform. 2017 May 31. doi: 10.1093/bib/bbx054. [Epub ahead of print]

PMID:
28575146
10.

ceRNAs in plants: computational approaches and associated challenges for target mimic research.

Paschoal AR, Lozada-Chávez I, Domingues DS, Stadler PF.

Brief Bioinform. 2017 May 30. doi: 10.1093/bib/bbx058. [Epub ahead of print]

PMID:
28575144
11.

Seeing the wood for the trees: a forest of methods for optimization and omic-network integration in metabolic modelling.

Vijayakumar S, Conway M, Lió P, Angione C.

Brief Bioinform. 2017 May 30. doi: 10.1093/bib/bbx053. [Epub ahead of print]

PMID:
28575143
12.

Optimizing drug development in oncology by clinical trial simulation: Why and how?

Gal J, Milano G, Ferrero JM, Saâda-Bouzid E, Viotti J, Chabaud S, Gougis P, Le Tourneau C, Schiappa R, Paquet A, Chamorey E.

Brief Bioinform. 2017 May 29. doi: 10.1093/bib/bbx055. [Epub ahead of print]

PMID:
28575140
13.

Bioinformatic analysis of bacteria and host cell dual RNA-sequencing experiments.

Marsh JW, Hayward RJ, Shetty AC, Mahurkar A, Humphrys MS, Myers GSA.

Brief Bioinform. 2017 May 23. doi: 10.1093/bib/bbx043. [Epub ahead of print]

PMID:
28535295
14.

Genome-wide discovery of viral microRNAs based on phylogenetic analysis and structural evolution of various human papillomavirus subtypes.

Weng SL, Huang KY, Weng JT, Hung FY, Chang TH, Lee TY.

Brief Bioinform. 2017 May 20. doi: 10.1093/bib/bbx046. [Epub ahead of print]

PMID:
28531277
15.

Large-scale data-driven integrative framework for extracting essential targets and processes from disease-associated gene data sets.

Mazandu GK, Chimusa ER, Rutherford K, Zekeng EG, Gebremariam ZZ, Onifade MY, Mulder NJ.

Brief Bioinform. 2017 May 18. doi: 10.1093/bib/bbx052. [Epub ahead of print]

PMID:
28520909
16.

Mutational signatures and mutable motifs in cancer genomes.

Rogozin IB, Pavlov YI, Goncearenco A, De S, Lada AG, Poliakov E, Panchenko AR, Cooper DN.

Brief Bioinform. 2017 May 11. doi: 10.1093/bib/bbx049. [Epub ahead of print]

PMID:
28498882
17.

Deep learning for healthcare: review, opportunities and challenges.

Miotto R, Wang F, Wang S, Jiang X, Dudley JT.

Brief Bioinform. 2017 May 6. doi: 10.1093/bib/bbx044. [Epub ahead of print]

PMID:
28481991
18.

Bioinformatics tools for quantitative and functional metagenome and metatranscriptome data analysis in microbes.

Niu SY, Yang J, McDermaid A, Zhao J, Kang Y, Ma Q.

Brief Bioinform. 2017 May 8. doi: 10.1093/bib/bbx051. [Epub ahead of print]

PMID:
28481971
19.

Advances in computational approaches in identifying synergistic drug combinations.

Sheng Z, Sun Y, Yin Z, Tang K, Cao Z.

Brief Bioinform. 2017 May 5. doi: 10.1093/bib/bbx047. [Epub ahead of print]

PMID:
28475767
20.

Bridging semantics and syntax with graph algorithms-state-of-the-art of extracting biomedical relations.

Luo Y, Uzuner Ö, Szolovits P.

Brief Bioinform. 2017 May 2. doi: 10.1093/bib/bbx048. [Epub ahead of print] No abstract available.

PMID:
28472242

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