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Items: 1 to 20 of 66

1.

The crystal structure of Pyrococcus abyssi tRNA (uracil-54, C5)-methyltransferase provides insights into its tRNA specificity.

Walbott H, Leulliot N, Grosjean H, Golinelli-Pimpaneau B.

Nucleic Acids Res. 2008 Sep;36(15):4929-40. doi: 10.1093/nar/gkn437.

2.

Structure of a TrmA-RNA complex: A consensus RNA fold contributes to substrate selectivity and catalysis in m5U methyltransferases.

Alian A, Lee TT, Griner SL, Stroud RM, Finer-Moore J.

Proc Natl Acad Sci U S A. 2008 May 13;105(19):6876-81. doi: 10.1073/pnas.0802247105.

3.

Dissecting protein-RNA recognition sites.

Bahadur RP, Zacharias M, Janin J.

Nucleic Acids Res. 2008 May;36(8):2705-16. doi: 10.1093/nar/gkn102.

4.

Predicting RNA-binding sites from the protein structure based on electrostatics, evolution and geometry.

Chen YC, Lim C.

Nucleic Acids Res. 2008 Mar;36(5):e29. doi: 10.1093/nar/gkn008.

5.

Structure of the yeast tRNA m7G methylation complex.

Leulliot N, Chaillet M, Durand D, Ulryck N, Blondeau K, van Tilbeurgh H.

Structure. 2008 Jan;16(1):52-61. doi: 10.1016/j.str.2007.10.025.

6.
8.

Evaluating conformational changes in protein structures binding RNA.

Ellis JJ, Jones S.

Proteins. 2008 Mar;70(4):1518-26.

PMID:
17910059
9.

The PUA domain - a structural and functional overview.

Pérez-Arellano I, Gallego J, Cervera J.

FEBS J. 2007 Oct;274(19):4972-84. Review.

10.

Indirect readout of tRNA for aminoacylation.

Perona JJ, Hou YM.

Biochemistry. 2007 Sep 18;46(37):10419-32. Review.

PMID:
17718520
11.

Inference of macromolecular assemblies from crystalline state.

Krissinel E, Henrick K.

J Mol Biol. 2007 Sep 21;372(3):774-97.

PMID:
17681537
12.
13.

Crystal structure of pseudouridine synthase RluA: indirect sequence readout through protein-induced RNA structure.

Hoang C, Chen J, Vizthum CA, Kandel JM, Hamilton CS, Mueller EG, Ferré-D'Amaré AR.

Mol Cell. 2006 Nov 17;24(4):535-45.

14.

Protein-RNA interactions: structural analysis and functional classes.

Ellis JJ, Broom M, Jones S.

Proteins. 2007 Mar 1;66(4):903-11.

PMID:
17186525
15.

Pseudouridine synthases.

Hamma T, Ferré-D'Amaré AR.

Chem Biol. 2006 Nov;13(11):1125-35. Review.

16.

Mechanistic investigations of the pseudouridine synthase RluA using RNA containing 5-fluorouridine.

Hamilton CS, Greco TM, Vizthum CA, Ginter JM, Johnston MV, Mueller EG.

Biochemistry. 2006 Oct 3;45(39):12029-38.

17.
18.

Structure of the 70S ribosome complexed with mRNA and tRNA.

Selmer M, Dunham CM, Murphy FV 4th, Weixlbaumer A, Petry S, Kelley AC, Weir JR, Ramakrishnan V.

Science. 2006 Sep 29;313(5795):1935-42.

19.

Snapshots of tRNA sulphuration via an adenylated intermediate.

Numata T, Ikeuchi Y, Fukai S, Suzuki T, Nureki O.

Nature. 2006 Jul 27;442(7101):419-24.

PMID:
16871210
20.

Prediction of RNA binding sites in proteins from amino acid sequence.

Terribilini M, Lee JH, Yan C, Jernigan RL, Honavar V, Dobbs D.

RNA. 2006 Aug;12(8):1450-62.

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