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J Neurosci Methods. 2012 Jun 30;208(1):66-78. doi: 10.1016/j.jneumeth.2012.04.013. Epub 2012 May 4.

Post-hoc selection of dynamic causal models.

Author information

1
Wellcome Trust Centre for Neuroimaging, Institute of Neurology, University College London, 12 Queen Square, WC1N 3BG, UK. m.rosa@ucl.ac.uk

Abstract

Dynamic causal modelling (DCM) was originally proposed as a hypothesis driven procedure in which a small number of neurobiologically motivated models are compared. Model comparison in this context usually proceeds by individually fitting each model to data and then approximating the corresponding model evidence with a free energy bound. However, a recent trend has emerged for comparing very large numbers of models in a more exploratory manner. This led Friston and Penny (2011) to propose a post-hoc approximation to the model evidence, which is computed by optimising only the largest (full) model of a set of models. The evidence for any (reduced) submodel is then obtained using a generalisation of the Savage-Dickey density ratio (Dickey, 1971). The benefit of this post-hoc approach is a huge reduction in the computational time required for model fitting. This is because only a single model is fitted to data, allowing a potentially huge model space to be searched relatively quickly. In this paper, we explore the relationship between the free energy bound and post-hoc approximations to the model evidence in the context of deterministic (bilinear) dynamic causal models (DCMs) for functional magnetic resonance imaging data.

PMID:
22561579
PMCID:
PMC3401996
DOI:
10.1016/j.jneumeth.2012.04.013
[Indexed for MEDLINE]
Free PMC Article
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