Format
Sort by
Items per page

Send to

Choose Destination

Search results

Items: 1 to 20 of 258

1.

Accumulation of NO2 -cobalamin in nutrient-stressed ammonia-oxidizing archaea and in the oxygen deficient zone of the eastern tropical North Pacific.

Heal KR, Qin W, Amin SA, Devol AH, Moffett JW, Armbrust EV, Stahl DA, Ingalls AE.

Environ Microbiol Rep. 2018 Aug;10(4):453-457. doi: 10.1111/1758-2229.12664. Epub 2018 Aug 8.

PMID:
30022612
2.

Nutrient transport suggests an evolutionary basis for charged archaeal surface layer proteins.

Li PN, Herrmann J, Tolar BB, Poitevin F, Ramdasi R, Bargar JR, Stahl DA, Jensen GJ, Francis CA, Wakatsuki S, van den Bedem H.

ISME J. 2018 Oct;12(10):2389-2402. doi: 10.1038/s41396-018-0191-0. Epub 2018 Jun 13.

PMID:
29899515
3.

Ammonia-oxidizing bacteria are the primary N2 O producers in an ammonia-oxidizing archaea dominated alkaline agricultural soil.

Meinhardt KA, Stopnisek N, Pannu MW, Strand SE, Fransen SC, Casciotti KL, Stahl DA.

Environ Microbiol. 2018 Apr 24. doi: 10.1111/1462-2920.14246. [Epub ahead of print]

PMID:
29687586
4.

Constraint-based modelling captures the metabolic versatility of Desulfovibrio vulgaris.

Flowers JJ, Richards MA, Baliga N, Meyer B, Stahl DA.

Environ Microbiol Rep. 2018 Apr;10(2):190-201. doi: 10.1111/1758-2229.12619. Epub 2018 Feb 19.

PMID:
29377633
5.

Key Metabolites and Mechanistic Changes for Salt Tolerance in an Experimentally Evolved Sulfate-Reducing Bacterium, Desulfovibrio vulgaris.

Zhou A, Lau R, Baran R, Ma J, von Netzer F, Shi W, Gorman-Lewis D, Kempher ML, He Z, Qin Y, Shi Z, Zane GM, Wu L, Bowen BP, Northen TR, Hillesland KL, Stahl DA, Wall JD, Arkin AP, Zhou J.

MBio. 2017 Nov 14;8(6). pii: e01780-17. doi: 10.1128/mBio.01780-17.

6.

Stress response of a marine ammonia-oxidizing archaeon informs physiological status of environmental populations.

Qin W, Amin SA, Lundeen RA, Heal KR, Martens-Habbena W, Turkarslan S, Urakawa H, Costa KC, Hendrickson EL, Wang T, Beck DA, Tiquia-Arashiro SM, Taub F, Holmes AD, Vajrala N, Berube PM, Lowe TM, Moffett JW, Devol AH, Baliga NS, Arp DJ, Sayavedra-Soto LA, Hackett M, Armbrust EV, Ingalls AE, Stahl DA.

ISME J. 2018 Feb;12(2):508-519. doi: 10.1038/ismej.2017.186. Epub 2017 Oct 20.

PMID:
29053148
7.

Nitrosopumilus maritimus gen. nov., sp. nov., Nitrosopumilus cobalaminigenes sp. nov., Nitrosopumilus oxyclinae sp. nov., and Nitrosopumilus ureiphilus sp. nov., four marine ammonia-oxidizing archaea of the phylum Thaumarchaeota.

Qin W, Heal KR, Ramdasi R, Kobelt JN, Martens-Habbena W, Bertagnolli AD, Amin SA, Walker CB, Urakawa H, Könneke M, Devol AH, Moffett JW, Armbrust EV, Jensen GJ, Ingalls AE, Stahl DA.

Int J Syst Evol Microbiol. 2017 Dec;67(12):5067-5079. doi: 10.1099/ijsem.0.002416. Epub 2017 Oct 16.

PMID:
29034851
8.

Identification and Characterization of the Major Porin of Desulfovibrio vulgaris Hildenborough.

Zeng L, Wooton E, Stahl DA, Walian PJ.

J Bacteriol. 2017 Oct 31;199(23). pii: e00286-17. doi: 10.1128/JB.00286-17. Print 2017 Dec 1.

9.

Robustness of a model microbial community emerges from population structure among single cells of a clonal population.

Thompson AW, Turkarslan S, Arens CE, López García de Lomana A, Raman AV, Stahl DA, Baliga NS.

Environ Microbiol. 2017 Aug;19(8):3059-3069. doi: 10.1111/1462-2920.13764. Epub 2017 May 29.

PMID:
28419704
10.

Mechanism for microbial population collapse in a fluctuating resource environment.

Turkarslan S, Raman AV, Thompson AW, Arens CE, Gillespie MA, von Netzer F, Hillesland KL, Stolyar S, López García de Lomana A, Reiss DJ, Gorman-Lewis D, Zane GM, Ranish JA, Wall JD, Stahl DA, Baliga NS.

Mol Syst Biol. 2017 Mar 20;13(3):919. doi: 10.15252/msb.20167058.

11.

Dynamic Succession of Groundwater Sulfate-Reducing Communities during Prolonged Reduction of Uranium in a Contaminated Aquifer.

Zhang P, He Z, Van Nostrand JD, Qin Y, Deng Y, Wu L, Tu Q, Wang J, Schadt CW, W Fields M, Hazen TC, Arkin AP, Stahl DA, Zhou J.

Environ Sci Technol. 2017 Apr 4;51(7):3609-3620. doi: 10.1021/acs.est.6b02980. Epub 2017 Mar 16.

PMID:
28300407
12.

Influence of oxygen availability on the activities of ammonia-oxidizing archaea.

Qin W, Meinhardt KA, Moffett JW, Devol AH, Virginia Armbrust E, Ingalls AE, Stahl DA.

Environ Microbiol Rep. 2017 Jun;9(3):250-256. doi: 10.1111/1758-2229.12525. Epub 2017 Mar 13.

PMID:
28211189
13.

Two distinct pools of B12 analogs reveal community interdependencies in the ocean.

Heal KR, Qin W, Ribalet F, Bertagnolli AD, Coyote-Maestas W, Hmelo LR, Moffett JW, Devol AH, Armbrust EV, Stahl DA, Ingalls AE.

Proc Natl Acad Sci U S A. 2017 Jan 10;114(2):364-369. doi: 10.1073/pnas.1608462114. Epub 2016 Dec 27.

14.

A Purple Cupredoxin from Nitrosopumilus maritimus Containing a Mononuclear Type 1 Copper Center with an Open Binding Site.

Hosseinzadeh P, Tian S, Marshall NM, Hemp J, Mullen T, Nilges MJ, Gao YG, Robinson H, Stahl DA, Gennis RB, Lu Y.

J Am Chem Soc. 2016 May 25;138(20):6324-7. doi: 10.1021/jacs.5b13128. Epub 2016 May 12.

PMID:
27120678
15.

Agricultural land usage transforms nitrifier population ecology.

Bertagnolli AD, McCalmont D, Meinhardt KA, Fransen SC, Strand S, Brown S, Stahl DA.

Environ Microbiol. 2016 Jun;18(6):1918-29. doi: 10.1111/1462-2920.13114. Epub 2016 Jan 21.

PMID:
26526405
16.

Confounding effects of oxygen and temperature on the TEX86 signature of marine Thaumarchaeota.

Qin W, Carlson LT, Armbrust EV, Devol AH, Moffett JW, Stahl DA, Ingalls AE.

Proc Natl Acad Sci U S A. 2015 Sep 1;112(35):10979-84. doi: 10.1073/pnas.1501568112. Epub 2015 Aug 17.

17.

A method to analyze, sort, and retain viability of obligate anaerobic microorganisms from complex microbial communities.

Thompson AW, Crow MJ, Wadey B, Arens C, Turkarslan S, Stolyar S, Elliott N, Petersen TW, van den Engh G, Stahl DA, Baliga NS.

J Microbiol Methods. 2015 Oct;117:74-7. doi: 10.1016/j.mimet.2015.07.009. Epub 2015 Jul 14.

18.

Rapid selective sweep of pre-existing polymorphisms and slow fixation of new mutations in experimental evolution of Desulfovibrio vulgaris.

Zhou A, Hillesland KL, He Z, Schackwitz W, Tu Q, Zane GM, Ma Q, Qu Y, Stahl DA, Wall JD, Hazen TC, Fields MW, Arkin AP, Zhou J.

ISME J. 2015 Nov;9(11):2360-72. doi: 10.1038/ismej.2015.45. Epub 2015 Apr 7.

19.

Evaluation of revised polymerase chain reaction primers for more inclusive quantification of ammonia-oxidizing archaea and bacteria.

Meinhardt KA, Bertagnolli A, Pannu MW, Strand SE, Brown SL, Stahl DA.

Environ Microbiol Rep. 2015 Apr;7(2):354-63. doi: 10.1111/1758-2229.12259. Epub 2015 Feb 12.

PMID:
25534249
20.

Influence of edaphic and management factors on the diversity and abundance of ammonia-oxidizing thaumarchaeota and bacteria in soils of bioenergy crop cultivars.

Bertagnolli AD, Meinhardt KA, Pannu M, Brown S, Strand S, Fransen SC, Stahl DA.

Environ Microbiol Rep. 2015 Apr;7(2):312-20. doi: 10.1111/1758-2229.12250. Epub 2015 Feb 26.

PMID:
25504683

Supplemental Content

Loading ...
Support Center