Format
Sort by
Items per page

Send to

Choose Destination

Search results

Items: 1 to 20 of 29

1.

Speciation network in Laurasiatheria: retrophylogenomic signals.

Doronina L, Churakov G, Kuritzin A, Shi J, Baertsch R, Clawson H, Schmitz J.

Genome Res. 2017 Jun;27(6):997-1003. doi: 10.1101/gr.210948.116. Epub 2017 Mar 15.

2.

The Beaver's Phylogenetic Lineage Illuminated by Retroposon Reads.

Doronina L, Matzke A, Churakov G, Stoll M, Huge A, Schmitz J.

Sci Rep. 2017 Mar 3;7:43562. doi: 10.1038/srep43562.

3.

Genome sequence of the basal haplorrhine primate Tarsius syrichta reveals unusual insertions.

Schmitz J, Noll A, Raabe CA, Churakov G, Voss R, Kiefmann M, Rozhdestvensky T, Brosius J, Baertsch R, Clawson H, Roos C, Zimin A, Minx P, Montague MJ, Wilson RK, Warren WC.

Nat Commun. 2016 Oct 6;7:12997. doi: 10.1038/ncomms12997.

4.

Genomic analysis reveals hidden biodiversity within colugos, the sister group to primates.

Mason VC, Li G, Minx P, Schmitz J, Churakov G, Doronina L, Melin AD, Dominy NJ, Lim NT, Springer MS, Wilson RK, Warren WC, Helgen KM, Murphy WJ.

Sci Adv. 2016 Aug 10;2(8):e1600633. doi: 10.1126/sciadv.1600633. eCollection 2016 Aug.

5.

Incomplete Lineage Sorting and Hybridization Statistics for Large-Scale Retroposon Insertion Data.

Kuritzin A, Kischka T, Schmitz J, Churakov G.

PLoS Comput Biol. 2016 Mar 11;12(3):e1004812. doi: 10.1371/journal.pcbi.1004812. eCollection 2016 Mar.

6.

The genome of the vervet (Chlorocebus aethiops sabaeus).

Warren WC, Jasinska AJ, García-Pérez R, Svardal H, Tomlinson C, Rocchi M, Archidiacono N, Capozzi O, Minx P, Montague MJ, Kyung K, Hillier LW, Kremitzki M, Graves T, Chiang C, Hughes J, Tran N, Huang Y, Ramensky V, Choi OW, Jung YJ, Schmitt CA, Juretic N, Wasserscheid J, Turner TR, Wiseman RW, Tuscher JJ, Karl JA, Schmitz JE, Zahn R, O'Connor DH, Redmond E, Nisbett A, Jacquelin B, Müller-Trutwin MC, Brenchley JM, Dione M, Antonio M, Schroth GP, Kaplan JR, Jorgensen MJ, Thomas GW, Hahn MW, Raney BJ, Aken B, Nag R, Schmitz J, Churakov G, Noll A, Stanyon R, Webb D, Thibaud-Nissen F, Nordborg M, Marques-Bonet T, Dewar K, Weinstock GM, Wilson RK, Freimer NB.

Genome Res. 2015 Dec;25(12):1921-33. doi: 10.1101/gr.192922.115. Epub 2015 Sep 16.

7.

Exploring Massive Incomplete Lineage Sorting in Arctoids (Laurasiatheria, Carnivora).

Doronina L, Churakov G, Shi J, Brosius J, Baertsch R, Clawson H, Schmitz J.

Mol Biol Evol. 2015 Dec;32(12):3194-204. doi: 10.1093/molbev/msv188. Epub 2015 Sep 3.

PMID:
26337548
8.

Corrigendum: Retrophylogenomics Place Tarsiers on the Evolutionary Branch of Anthropoids.

Hartig G, Churakov G, Warren WC, Brosius J, Makałowski W, Schmitz J.

Sci Rep. 2015 Jul 28;5:12590. doi: 10.1038/srep12590. No abstract available.

9.

Ancient traces of tailless retropseudogenes in therian genomes.

Noll A, Raabe CA, Churakov G, Brosius J, Schmitz J.

Genome Biol Evol. 2015 Feb 26;7(3):889-900. doi: 10.1093/gbe/evv040.

10.

Multiple lineages of ancient CR1 retroposons shaped the early genome evolution of amniotes.

Suh A, Churakov G, Ramakodi MP, Platt RN 2nd, Jurka J, Kojima KK, Caballero J, Smit AF, Vliet KA, Hoffmann FG, Brosius J, Green RE, Braun EL, Ray DA, Schmitz J.

Genome Biol Evol. 2014 Dec 11;7(1):205-17. doi: 10.1093/gbe/evu256.

11.

GPAC-genome presence/absence compiler: a web application to comparatively visualize multiple genome-level changes.

Noll A, Grundmann N, Churakov G, Brosius J, Makałowski W, Schmitz J.

Mol Biol Evol. 2015 Jan;32(1):275-86. doi: 10.1093/molbev/msu276. Epub 2014 Sep 25.

PMID:
25261406
12.

Retrophylogenomics place tarsiers on the evolutionary branch of anthropoids.

Hartig G, Churakov G, Warren WC, Brosius J, Makałowski W, Schmitz J.

Sci Rep. 2013;3:1756. doi: 10.1038/srep01756. Erratum in: Sci Rep. 2015;5:12590.

13.

Ancestry of the Australian termitivorous numbat.

Zemann A, Churakov G, Donnellan S, Grützner F, Zhao F, Brosius J, Schmitz J.

Mol Biol Evol. 2013 May;30(5):1041-5. doi: 10.1093/molbev/mst032. Epub 2013 Feb 21.

PMID:
23429857
14.

Retroposon insertion patterns of neoavian birds: strong evidence for an extensive incomplete lineage sorting era.

Matzke A, Churakov G, Berkes P, Arms EM, Kelsey D, Brosius J, Kriegs JO, Schmitz J.

Mol Biol Evol. 2012 Jun;29(6):1497-501. doi: 10.1093/molbev/msr319. Epub 2012 Jan 3.

PMID:
22319163
15.

Mesozoic retroposons reveal parrots as the closest living relatives of passerine birds.

Suh A, Paus M, Kiefmann M, Churakov G, Franke FA, Brosius J, Kriegs JO, Schmitz J.

Nat Commun. 2011 Aug 23;2:443. doi: 10.1038/ncomms1448.

16.

A novel web-based TinT application and the chronology of the Primate Alu retroposon activity.

Churakov G, Grundmann N, Kuritzin A, Brosius J, Makałowski W, Schmitz J.

BMC Evol Biol. 2010 Dec 2;10:376. doi: 10.1186/1471-2148-10-376.

17.

Tracking marsupial evolution using archaic genomic retroposon insertions.

Nilsson MA, Churakov G, Sommer M, Tran NV, Zemann A, Brosius J, Schmitz J.

PLoS Biol. 2010 Jul 27;8(7):e1000436. doi: 10.1371/journal.pbio.1000436.

18.

Retroposon insertions provide insights into deep lagomorph evolution.

Kriegs JO, Zemann A, Churakov G, Matzke A, Ohme M, Zischler H, Brosius J, Kryger U, Schmitz J.

Mol Biol Evol. 2010 Dec;27(12):2678-81. doi: 10.1093/molbev/msq162. Epub 2010 Jun 28.

PMID:
20584773
19.

Rodent evolution: back to the root.

Churakov G, Sadasivuni MK, Rosenbloom KR, Huchon D, Brosius J, Schmitz J.

Mol Biol Evol. 2010 Jun;27(6):1315-26. doi: 10.1093/molbev/msq019. Epub 2010 Jan 25.

PMID:
20100942
20.

Mosaic retroposon insertion patterns in placental mammals.

Churakov G, Kriegs JO, Baertsch R, Zemann A, Brosius J, Schmitz J.

Genome Res. 2009 May;19(5):868-75. doi: 10.1101/gr.090647.108. Epub 2009 Mar 4.

Supplemental Content

Loading ...
Support Center