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Items: 1 to 20 of 136

1.

Neuron Names: A Gene- and Property-Based Name Format, With Special Reference to Cortical Neurons.

Shepherd GM, Marenco L, Hines ML, Migliore M, McDougal RA, Carnevale NT, Newton AJH, Surles-Zeigler M, Ascoli GA.

Front Neuroanat. 2019 Mar 21;13:25. doi: 10.3389/fnana.2019.00025. eCollection 2019.

2.

Genetic Single Neuron Anatomy Reveals Fine Granularity of Cortical Axo-Axonic Cells.

Wang X, Tucciarone J, Jiang S, Yin F, Wang BS, Wang D, Jia Y, Jia X, Li Y, Yang T, Xu Z, Akram MA, Wang Y, Zeng S, Ascoli GA, Mitra P, Gong H, Luo Q, Huang ZJ.

Cell Rep. 2019 Mar 12;26(11):3145-3159.e5. doi: 10.1016/j.celrep.2019.02.040.

3.

PaperBot: open-source web-based search and metadata organization of scientific literature.

Maraver P, Armañanzas R, Gillette TA, Ascoli GA.

BMC Bioinformatics. 2019 Jan 24;20(1):50. doi: 10.1186/s12859-019-2613-z.

4.

Evolving Simple Models of Diverse Intrinsic Dynamics in Hippocampal Neuron Types.

Venkadesh S, Komendantov AO, Listopad S, Scott EO, De Jong K, Krichmar JL, Ascoli GA.

Front Neuroinform. 2018 Mar 13;12:8. doi: 10.3389/fninf.2018.00008. eCollection 2018.

5.

An open repository for single-cell reconstructions of the brain forest.

Akram MA, Nanda S, Maraver P, Armañanzas R, Ascoli GA.

Sci Data. 2018 Feb 27;5:180006. doi: 10.1038/sdata.2018.6.

6.

Design and implementation of multi-signal and time-varying neural reconstructions.

Nanda S, Chen H, Das R, Bhattacharjee S, Cuntz H, Torben-Nielsen B, Peng H, Cox DN, De Schutter E, Ascoli GA.

Sci Data. 2018 Jan 23;5:170207. doi: 10.1038/sdata.2017.207.

7.

A Commitment to Open Source in Neuroscience.

Gleeson P, Davison AP, Silver RA, Ascoli GA.

Neuron. 2017 Dec 6;96(5):964-965. doi: 10.1016/j.neuron.2017.10.013.

8.

Morphological determinants of dendritic arborization neurons in Drosophila larva.

Nanda S, Das R, Bhattacharjee S, Cox DN, Ascoli GA.

Brain Struct Funct. 2018 Apr;223(3):1107-1120. doi: 10.1007/s00429-017-1541-9. Epub 2017 Nov 1.

PMID:
29094302
9.

Training for Data Science: Imagine There's no Countries.

Ascoli GA.

Neuroinformatics. 2017 Oct;15(4):301-302. doi: 10.1007/s12021-017-9345-x. No abstract available.

PMID:
29047022
10.

Dendritic Cytoskeletal Architecture Is Modulated by Combinatorial Transcriptional Regulation in Drosophila melanogaster.

Das R, Bhattacharjee S, Patel AA, Harris JM, Bhattacharya S, Letcher JM, Clark SG, Nanda S, Iyer EPR, Ascoli GA, Cox DN.

Genetics. 2017 Dec;207(4):1401-1421. doi: 10.1534/genetics.117.300393. Epub 2017 Oct 12.

11.

Metrics for comparing neuronal tree shapes based on persistent homology.

Li Y, Wang D, Ascoli GA, Mitra P, Wang Y.

PLoS One. 2017 Aug 15;12(8):e0182184. doi: 10.1371/journal.pone.0182184. eCollection 2017.

12.

Molecular fingerprinting of principal neurons in the rodent hippocampus: A neuroinformatics approach.

Hamilton DJ, White CM, Rees CL, Wheeler DW, Ascoli GA.

J Pharm Biomed Anal. 2017 Sep 10;144:269-278. doi: 10.1016/j.jpba.2017.03.062. Epub 2017 Apr 29.

13.

Neurochemical Markers in the Mammalian Brain: Structure, Roles in Synaptic Communication, and Pharmacological Relevance.

Rees CL, White CM, Ascoli GA.

Curr Med Chem. 2017;24(28):3077-3103. doi: 10.2174/0929867324666170414163506. Review.

14.

Automatic tracing of ultra-volumes of neuronal images.

Peng H, Zhou Z, Meijering E, Zhao T, Ascoli GA, Hawrylycz M.

Nat Methods. 2017 Mar 31;14(4):332-333. doi: 10.1038/nmeth.4233. No abstract available.

PMID:
28362437
15.

An ontology-based search engine for digital reconstructions of neuronal morphology.

Polavaram S, Ascoli GA.

Brain Inform. 2017 Jun;4(2):123-134. doi: 10.1007/s40708-017-0062-x. Epub 2017 Mar 23.

16.

Win-win data sharing in neuroscience.

Ascoli GA, Maraver P, Nanda S, Polavaram S, Armañanzas R.

Nat Methods. 2017 Jan 31;14(2):112-116. doi: 10.1038/nmeth.4152.

17.

Weighing the Evidence in Peters' Rule: Does Neuronal Morphology Predict Connectivity?

Rees CL, Moradi K, Ascoli GA.

Trends Neurosci. 2017 Feb;40(2):63-71. doi: 10.1016/j.tins.2016.11.007. Epub 2016 Dec 29. Review.

18.

Graph Theoretic and Motif Analyses of the Hippocampal Neuron Type Potential Connectome.

Rees CL, Wheeler DW, Hamilton DJ, White CM, Komendantov AO, Ascoli GA.

eNeuro. 2016 Nov 18;3(6). pii: ENEURO.0205-16.2016. eCollection 2016 Nov-Dec.

19.

Name-calling in the hippocampus (and beyond): coming to terms with neuron types and properties.

Hamilton DJ, Wheeler DW, White CM, Rees CL, Komendantov AO, Bergamino M, Ascoli GA.

Brain Inform. 2017 Mar;4(1):1-12. doi: 10.1007/s40708-016-0053-3. Epub 2016 Jun 9.

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