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Metabolic Support of Excised, Living Brain Tissues During Magnetic Resonance Microscopy Acquisition.

Flint JJ, Menon K, Hansen B, Forder J, Blackband SJ.

J Vis Exp. 2017 Oct 18;(128). doi: 10.3791/56282.


Magnetic Resonance Microscopy (MRM) of Single Mammalian Myofibers and Myonuclei.

Lee CH, Bengtsson N, Chrzanowski SM, Flint JJ, Walter GA, Blackband SJ.

Sci Rep. 2017 Jan 3;7:39496. doi: 10.1038/srep39496.


Diffusion tensor microscopy data (15.6 μm in-plane) of white matter tracts in the human, pig, and rat spinal cord with corresponding tissue histology.

Flint JJ, Hansen B, Blackband SJ.

Data Brief. 2016 Aug 18;9:271-4. doi: 10.1016/j.dib.2016.08.020. eCollection 2016 Dec.


A Microperfusion and In-Bore Oxygenator System Designed for Magnetic Resonance Microscopy Studies on Living Tissue Explants.

Flint JJ, Menon K, Hansen B, Forder J, Blackband SJ.

Sci Rep. 2015 Dec 15;5:18095. doi: 10.1038/srep18095.


Magnetic resonance microscopy of renal and biliary abnormalities in excised tissues from a mouse model of autosomal recessive polycystic kidney disease.

Lee CH, O'Connor AK, Yang C, Tate JM, Schoeb TR, Flint JJ, Blackband SJ, Guay-Woodford LM.

Physiol Rep. 2015 Aug;3(8). pii: e12517. doi: 10.14814/phy2.12517.


Visualization of synaptic domains in the Drosophila brain by magnetic resonance microscopy at 10 micron isotropic resolution.

Lee CH, Blackband SJ, Fernandez-Funez P.

Sci Rep. 2015 Mar 10;5:8920. doi: 10.1038/srep08920.


Dictionary learning on the manifold of square root densities and application to reconstruction of diffusion propagator fields.

Sun J, Xie Y, Ye W, Ho J, Entezari A, Blackband SJ, Vemuri BC.

Inf Process Med Imaging. 2013;23:619-31.


Oscillating and pulsed gradient diffusion magnetic resonance microscopy over an extended b-value range: implications for the characterization of tissue microstructure.

Portnoy S, Flint JJ, Blackband SJ, Stanisz GJ.

Magn Reson Med. 2013 Apr;69(4):1131-45. doi: 10.1002/mrm.24325. Epub 2012 May 10.


Temporal scaling characteristics of diffusion as a new MRI contrast: findings in rat hippocampus.

Özarslan E, Shepherd TM, Koay CG, Blackband SJ, Basser PJ.

Neuroimage. 2012 Apr 2;60(2):1380-93. doi: 10.1016/j.neuroimage.2012.01.105. Epub 2012 Jan 26.


Magnetic resonance microscopy of human and porcine neurons and cellular processes.

Flint JJ, Hansen B, Portnoy S, Lee CH, King MA, Fey M, Vincent F, Stanisz GJ, Vestergaard-Poulsen P, Blackband SJ.

Neuroimage. 2012 Apr 2;60(2):1404-11. doi: 10.1016/j.neuroimage.2012.01.050. Epub 2012 Jan 14.


An efficient interlaced multi-shell sampling scheme for reconstruction of diffusion propagators.

Ye W, Portnoy S, Entezari A, Blackband SJ, Vemuri BC.

IEEE Trans Med Imaging. 2012 May;31(5):1043-50. doi: 10.1109/TMI.2012.2184551. Epub 2012 Jan 16.


In vivo MR studies of glycine and glutathione metabolism in a rat mammary tumor.

Thelwall PE, Simpson NE, Rabbani ZN, Clark MD, Pourdeyhimi R, Macdonald JM, Blackband SJ, Gamcsik MP.

NMR Biomed. 2012 Feb;25(2):271-8. doi: 10.1002/nbm.1745. Epub 2011 Jul 12.


Diffusion-weighted MRI and quantitative biophysical modeling of hippocampal neurite loss in chronic stress.

Vestergaard-Poulsen P, Wegener G, Hansen B, Bjarkam CR, Blackband SJ, Nielsen NC, Jespersen SN.

PLoS One. 2011;6(7):e20653. doi: 10.1371/journal.pone.0020653. Epub 2011 Jul 1.



Ye W, Portnoy S, Entezari A, Vemuri BC, Blackband SJ.

Proc IEEE Int Symp Biomed Imaging. 2011 Jun 9;2011:397-400. Epub 2011 Mar 30.


Diffusion tensor microscopy in human nervous tissue with quantitative correlation based on direct histological comparison.

Hansen B, Flint JJ, Heon-Lee C, Fey M, Vincent F, King MA, Vestergaard-Poulsen P, Blackband SJ.

Neuroimage. 2011 Aug 15;57(4):1458-65. doi: 10.1016/j.neuroimage.2011.04.052. Epub 2011 May 3.


Non-invasive monitoring of L-2-oxothiazolidine-4-carboxylate metabolism in the rat brain by in vivo 13C magnetic resonance spectroscopy.

Gamcsik MP, Clark MD, Ludeman SM, Springer JB, D'Alessandro MA, Simpson NE, Pourdeyhimi R, Johnson CB, Teeter SD, Blackband SJ, Thelwall PE.

Neurochem Res. 2011 Mar;36(3):443-51. doi: 10.1007/s11064-010-0362-5. Epub 2010 Dec 15.


Cellular-level diffusion tensor microscopy and fiber tracking in mammalian nervous tissue with direct histological correlation.

Flint JJ, Hansen B, Fey M, Schmidig D, King MA, Vestergaard-Poulsen P, Blackband SJ.

Neuroimage. 2010 Aug 15;52(2):556-61. doi: 10.1016/j.neuroimage.2010.04.031. Epub 2010 Apr 18.


Aldehyde fixative solutions alter the water relaxation and diffusion properties of nervous tissue.

Shepherd TM, Thelwall PE, Stanisz GJ, Blackband SJ.

Magn Reson Med. 2009 Jul;62(1):26-34. doi: 10.1002/mrm.21977.


Magnetic resonance microscopy of mammalian neurons.

Flint JJ, Lee CH, Hansen B, Fey M, Schmidig D, Bui JD, King MA, Vestergaard-Poulsen P, Blackband SJ.

Neuroimage. 2009 Jul 15;46(4):1037-40. doi: 10.1016/j.neuroimage.2009.03.009. Epub 2009 Mar 12.

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