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Items: 1 to 20 of 235

1.

A Glutamatergic Spine Model to Enable Multi-Scale Modeling of Nonlinear Calcium Dynamics.

Hu E, Mergenthal A, Bingham CS, Song D, Bouteiller JM, Berger TW.

Front Comput Neurosci. 2018 Jul 27;12:58. doi: 10.3389/fncom.2018.00058. eCollection 2018.

2.

Model-Based Analysis of Electrode Placement and Pulse Amplitude for Hippocampal Stimulation.

Bingham CS, Loizos K, Yu GJ, Gilbert A, Bouteiller JC, Song D, Lazzi G, Berger TW.

IEEE Trans Biomed Eng. 2018 Jan 25. doi: 10.1109/TBME.2018.2791860. [Epub ahead of print]

PMID:
29993519
3.

ASIC Implementation of a Nonlinear Dynamical Model for Hippocampal Prosthesis.

Qiao Z, Han Y, Han X, Xu H, Li WXY, Song D, Berger TW, Cheung RCC.

Neural Comput. 2018 Sep;30(9):2472-2499. doi: 10.1162/neco_a_01107. Epub 2018 Jun 27.

PMID:
29949460
4.

Developing a hippocampal neural prosthetic to facilitate human memory encoding and recall.

Hampson RE, Song D, Robinson BS, Fetterhoff D, Dakos AS, Roeder BM, She X, Wicks RT, Witcher MR, Couture DE, Laxton AW, Munger-Clary H, Popli G, Sollman MJ, Whitlow CT, Marmarelis VZ, Berger TW, Deadwyler SA.

J Neural Eng. 2018 Jun;15(3):036014. doi: 10.1088/1741-2552/aaaed7. Epub 2018 Mar 28.

PMID:
29589592
5.

Designing Patient-Specific Optimal Neurostimulation Patterns for Seizure Suppression.

Sandler RA, Geng K, Song D, Hampson RE, Witcher MR, Deadwyler SA, Berger TW, Marmarelis VZ.

Neural Comput. 2018 May;30(5):1180-1208. doi: 10.1162/NECO_a_01075. Epub 2018 Mar 22.

PMID:
29566356
6.

Evolving Applications, Technological Challenges and Future Opportunities in Neuromodulation: Proceedings of the Fifth Annual Deep Brain Stimulation Think Tank.

Ramirez-Zamora A, Giordano JJ, Gunduz A, Brown P, Sanchez JC, Foote KD, Almeida L, Starr PA, Bronte-Stewart HM, Hu W, McIntyre C, Goodman W, Kumsa D, Grill WM, Walker HC, Johnson MD, Vitek JL, Greene D, Rizzuto DS, Song D, Berger TW, Hampson RE, Deadwyler SA, Hochberg LR, Schiff ND, Stypulkowski P, Worrell G, Tiruvadi V, Mayberg HS, Jimenez-Shahed J, Nanda P, Sheth SA, Gross RE, Lempka SF, Li L, Deeb W, Okun MS.

Front Neurosci. 2018 Jan 24;11:734. doi: 10.3389/fnins.2017.00734. eCollection 2017.

7.

Mechanism-Based and Input-Output Modeling of the Key Neuronal Connections and Signal Transformations in the CA3-CA1 Regions of the Hippocampus.

Geng K, Shin DC, Song D, Hampson RE, Deadwyler SA, Berger TW, Marmarelis VZ.

Neural Comput. 2018 Jan;30(1):149-183. doi: 10.1162/neco_a_01031. Epub 2017 Oct 24.

PMID:
29064783
8.

Chronic multi-region recording from the rat hippocampus in vivo with a flexible Parylene-based multi-electrode array.

Huijing Xu, Weltman A, Scholten K, Meng E, Berger TW, Dong Song.

Conf Proc IEEE Eng Med Biol Soc. 2017 Jul;2017:1716-1719. doi: 10.1109/EMBC.2017.8037173.

PMID:
29060217
9.

Multi-resolution multi-trial sparse classification model for decoding visual memories from hippocampal spikes in human.

Dong Song, Xiwei She, Hampson RE, Deadwyler SA, Berger TW.

Conf Proc IEEE Eng Med Biol Soc. 2017 Jul;2017:1046-1049. doi: 10.1109/EMBC.2017.8037006.

PMID:
29060053
10.

Acute in vivo testing of a conformal polymer microelectrode array for multi-region hippocampal recordings.

Xu H, Hirschberg AW, Scholten K, Berger TW, Song D, Meng E.

J Neural Eng. 2018 Feb;15(1):016017. doi: 10.1088/1741-2552/aa9451.

PMID:
29044049
11.

Development of a Computational Approach/Model to Explore NMDA Receptors Functions.

Keller AF, Bouteiller JC, Berger TW.

Methods Mol Biol. 2017;1677:291-306. doi: 10.1007/978-1-4939-7321-7_17.

PMID:
28986881
12.

Fractionation of sulfur (S) in beech (Fagus sylvatica) forest soils in relation to distance from the stem base as useful tool for modeling S biogeochemistry.

Hanousek O, Prohaska T, Kulhanek M, Balik J, Tejnecky V, Berger TW.

Model Earth Syst Environ. 2017 Sep;3(3):1065-1079. doi: 10.1007/s40808-017-0353-5. Epub 2017 Aug 9.

13.

Declining atmospheric deposition of heavy metals over the last three decades is reflected in soil and foliage of 97 beech (Fagus sylvatica) stands in the Vienna Woods.

Türtscher S, Berger P, Lindebner L, Berger TW.

Environ Pollut. 2017 Nov;230:561-573. doi: 10.1016/j.envpol.2017.06.080. Epub 2017 Jul 11.

14.

Development of a detailed model of calcium dynamics at the postsynaptic spine of an excitatory synapse.

Hu EY, Bouteiller JC, Dong Song, Berger TW.

Conf Proc IEEE Eng Med Biol Soc. 2016 Aug;2016:6102-6105. doi: 10.1109/EMBC.2016.7592121.

PMID:
28269645
15.

A flexible parylene probe for in vivo recordings from multiple subregions of the rat hippocampus.

Huijing Xu, Weltman A, Min-Chi Hsiao, Scholten K, Meng E, Berger TW, Dong Song.

Conf Proc IEEE Eng Med Biol Soc. 2016 Aug;2016:2806-2809. doi: 10.1109/EMBC.2016.7591313.

PMID:
28268901
16.

A large-scale detailed neuronal model of electrical stimulation of the dentate gyrus and perforant path as a platform for electrode design and optimization.

Bingham CS, Loizos K, Gene Yu, Gilbert A, Bouteiller JM, Dong Song, Lazzi G, Berger TW.

Conf Proc IEEE Eng Med Biol Soc. 2016 Aug;2016:2794-2797. doi: 10.1109/EMBC.2016.7591310.

PMID:
28268898
17.

Monte Carlo validation of spike-timing-dependent plasticity identification from spiking activity.

Robinson BS, Berger TW, Dong Song.

Conf Proc IEEE Eng Med Biol Soc. 2016 Aug;2016:1624-1627. doi: 10.1109/EMBC.2016.7591024.

PMID:
28268640
18.

Decoding memory features from hippocampal spiking activities using sparse classification models.

Dong Song, Hampson RE, Robinson BS, Marmarelis VZ, Deadwyler SA, Berger TW.

Conf Proc IEEE Eng Med Biol Soc. 2016 Aug;2016:1620-1623. doi: 10.1109/EMBC.2016.7591023.

PMID:
28268639
19.

A bi-directional communication paradigm between parallel NEURON and an external non-neuron process.

Hendrickson PJ, Bingham C, Dong Song, Berger TW.

Conf Proc IEEE Eng Med Biol Soc. 2016 Aug;2016:1413-1416. doi: 10.1109/EMBC.2016.7590973.

PMID:
28268591
20.

Place field detection using grid-based clustering in a large-scale computational model of the rat dentate gyrus.

Yu GJ, Dong Song, Berger TW.

Conf Proc IEEE Eng Med Biol Soc. 2016 Aug;2016:1405-1408. doi: 10.1109/EMBC.2016.7590971.

PMID:
28268589

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