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Items: 1 to 20 of 28

1.

Rapid Evolution of Ovarian-Biased Genes in the Yellow Fever Mosquito (Aedes aegypti).

Whittle CA, Extavour CG.

Genetics. 2017 Aug;206(4):2119-2137. doi: 10.1534/genetics.117.201343. Epub 2017 Jun 19.

2.

Causes and evolutionary consequences of primordial germ-cell specification mode in metazoans.

Whittle CA, Extavour CG.

Proc Natl Acad Sci U S A. 2017 Jun 6;114(23):5784-5791. doi: 10.1073/pnas.1610600114.

3.

Refuting the hypothesis that the acquisition of germ plasm accelerates animal evolution.

Whittle CA, Extavour CG.

Nat Commun. 2016 Aug 31;7:12637. doi: 10.1038/ncomms12637.

4.
5.

Codon and Amino Acid Usage Are Shaped by Selection Across Divergent Model Organisms of the Pancrustacea.

Whittle CA, Extavour CG.

G3 (Bethesda). 2015 Sep 17;5(11):2307-21. doi: 10.1534/g3.115.021402.

6.

Recent and massive expansion of the mating-type-specific region in the smut fungus Microbotryum.

Whittle CA, Votintseva A, Ridout K, Filatov DA.

Genetics. 2015 Mar;199(3):809-16. doi: 10.1534/genetics.114.171702. Epub 2015 Jan 7.

7.

Intron evolution in Neurospora: the role of mutational bias and selection.

Sun Y, Whittle CA, Corcoran P, Johannesson H.

Genome Res. 2015 Jan;25(1):100-10. doi: 10.1101/gr.175653.114. Epub 2014 Oct 23.

8.

Dynamics of transcriptome evolution in the model eukaryote Neurospora.

Whittle CA, Sun Y, Johannesson H.

J Evol Biol. 2014 Jun;27(6):1125-35. doi: 10.1111/jeb.12386. Epub 2014 May 22.

9.

Evolutionary dynamics of sex-biased genes in a hermaphrodite fungus.

Whittle CA, Johannesson H.

Mol Biol Evol. 2013 Nov;30(11):2435-46. doi: 10.1093/molbev/mst143. Epub 2013 Aug 20.

PMID:
23966547
10.

Neurospora as a model to empirically test central hypotheses in eukaryotic genome evolution: why this fungal genus offers promising opportunities.

Whittle CA, Johannesson H.

Bioessays. 2012 Nov;34(11):934-7. doi: 10.1002/bies.201200110. Epub 2012 Sep 12. Review.

PMID:
22968834
11.

Large-scale introgression shapes the evolution of the mating-type chromosomes of the filamentous ascomycete Neurospora tetrasperma.

Sun Y, Corcoran P, Menkis A, Whittle CA, Andersson SG, Johannesson H.

PLoS Genet. 2012;8(7):e1002820. doi: 10.1371/journal.pgen.1002820. Epub 2012 Jul 26.

12.

Genome-wide selection on codon usage at the population level in the fungal model organism Neurospora crassa.

Whittle CA, Sun Y, Johannesson H.

Mol Biol Evol. 2012 Aug;29(8):1975-86. doi: 10.1093/molbev/mss065. Epub 2012 Feb 14.

PMID:
22334579
13.

Evolution of synonymous codon usage in Neurospora tetrasperma and Neurospora discreta.

Whittle CA, Sun Y, Johannesson H.

Genome Biol Evol. 2011;3:332-43. doi: 10.1093/gbe/evr018. Epub 2011 Mar 14.

14.
15.

Consequences of reproductive mode on genome evolution in fungi.

Whittle CA, Nygren K, Johannesson H.

Fungal Genet Biol. 2011 Jul;48(7):661-7. doi: 10.1016/j.fgb.2011.02.005. Epub 2011 Mar 6. Review.

PMID:
21362492
16.

Degeneration in codon usage within the region of suppressed recombination in the mating-type chromosomes of Neurospora tetrasperma.

Whittle CA, Sun Y, Johannesson H.

Eukaryot Cell. 2011 Apr;10(4):594-603. doi: 10.1128/EC.00284-10. Epub 2011 Feb 18.

17.
18.

Comparative transcript analyses of the ovule, microspore, and mature pollen in Brassica napus.

Whittle CA, Malik MR, Li R, Krochko JE.

Plant Mol Biol. 2010 Feb;72(3):279-99. doi: 10.1007/s11103-009-9567-x. Epub 2009 Dec 1.

PMID:
19949835
19.

Transcript profiling provides evidence of functional divergence and expression networks among ribosomal protein gene paralogs in Brassica napus.

Whittle CA, Krochko JE.

Plant Cell. 2009 Aug;21(8):2203-19. doi: 10.1105/tpc.109.068411. Epub 2009 Aug 25.

20.

Gender-specific selection on codon usage in plant genomes.

Whittle CA, Malik MR, Krochko JE.

BMC Genomics. 2007 Jun 13;8:169.

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