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Items: 1 to 20 of 29


Early X chromosome inactivation during human preimplantation development revealed by single-cell RNA-sequencing.

Moreira de Mello JC, Fernandes GR, Vibranovski MD, Pereira LV.

Sci Rep. 2017 Sep 7;7(1):10794. doi: 10.1038/s41598-017-11044-z.


Unveiling the Impact of the Genomic Architecture on the Evolution of Vertebrate microRNAs.

França GS, Hinske LC, Galante PA, Vibranovski MD.

Front Genet. 2017 Mar 21;8:34. doi: 10.3389/fgene.2017.00034. eCollection 2017. Review.


Host gene constraints and genomic context impact the expression and evolution of human microRNAs.

França GS, Vibranovski MD, Galante PA.

Nat Commun. 2016 Apr 25;7:11438. doi: 10.1038/ncomms11438.


Meiotic sex chromosome inactivation in Drosophila.

Vibranovski MD.

J Genomics. 2014 Jun 1;2:104-17. doi: 10.7150/jgen.8178. eCollection 2014. Review.


A novel dataset for identifying sex-biased genes in Drosophila.

VanKuren NW, Vibranovski MD.

J Genomics. 2014 Mar 10;2:64-7. doi: 10.7150/jgen.7955. eCollection 2014.


A long-term demasculinization of X-linked intergenic noncoding RNAs in Drosophila melanogaster.

Gao G, Vibranovski MD, Zhang L, Li Z, Liu M, Zhang YE, Li X, Zhang W, Fan Q, VanKuren NW, Long M, Wei L.

Genome Res. 2014 Apr;24(4):629-38. doi: 10.1101/gr.165837.113. Epub 2014 Jan 9.


New gene evolution: little did we know.

Long M, VanKuren NW, Chen S, Vibranovski MD.

Annu Rev Genet. 2013;47:307-33. doi: 10.1146/annurev-genet-111212-133301. Epub 2013 Sep 13. Review.


New genes expressed in human brains: implications for annotating evolving genomes.

Zhang YE, Landback P, Vibranovski M, Long M.

Bioessays. 2012 Nov;34(11):982-91. doi: 10.1002/bies.201200008. Epub 2012 Sep 24. Review.


Segmental dataset and whole body expression data do not support the hypothesis that non-random movement is an intrinsic property of Drosophila retrogenes.

Vibranovski MD, Zhang YE, Kemkemer C, VanKuren NW, Lopes HF, Karr TL, Long M.

BMC Evol Biol. 2012 Sep 5;12:169. doi: 10.1186/1471-2148-12-169.


Re-analysis of the larval testis data on meiotic sex chromosome inactivation revealed evidence for tissue-specific gene expression related to the drosophila X chromosome.

Vibranovski MD, Zhang YE, Kemkemer C, Lopes HF, Karr TL, Long M.

BMC Biol. 2012 Jun 12;10:49; author reply 50. doi: 10.1186/1741-7007-10-49.


Reshaping of global gene expression networks and sex-biased gene expression by integration of a young gene.

Chen S, Ni X, Krinsky BH, Zhang YE, Vibranovski MD, White KP, Long M.

EMBO J. 2012 Jun 13;31(12):2798-809. doi: 10.1038/emboj.2012.108. Epub 2012 Apr 27.


Retrogenes moved out of the z chromosome in the silkworm.

Wang J, Long M, Vibranovski MD.

J Mol Evol. 2012 Apr;74(3-4):113-26. doi: 10.1007/s00239-012-9499-y. Epub 2012 Apr 26.


Accelerated recruitment of new brain development genes into the human genome.

Zhang YE, Landback P, Vibranovski MD, Long M.

PLoS Biol. 2011 Oct;9(10):e1001179. doi: 10.1371/journal.pbio.1001179. Epub 2011 Oct 18.


Evolutionary patterns of RNA-based duplication in non-mammalian chordates.

Chen M, Zou M, Fu B, Li X, Vibranovski MD, Gan X, Wang D, Wang W, Long M, He S.

PLoS One. 2011;6(7):e21466. doi: 10.1371/journal.pone.0021466. Epub 2011 Jul 11.


A cautionary note for retrocopy identification: DNA-based duplication of intron-containing genes significantly contributes to the origination of single exon genes.

Zhang YE, Vibranovski MD, Krinsky BH, Long M.

Bioinformatics. 2011 Jul 1;27(13):1749-53. doi: 10.1093/bioinformatics/btr280. Epub 2011 May 5.


Deficiency of X-linked inverted duplicates with male-biased expression and the underlying evolutionary mechanisms in the Drosophila genome.

Chen ZX, Zhang YE, Vibranovski M, Luo J, Gao G, Long M.

Mol Biol Evol. 2011 Oct;28(10):2823-32. doi: 10.1093/molbev/msr101. Epub 2011 May 5.


Chromosomal redistribution of male-biased genes in mammalian evolution with two bursts of gene gain on the X chromosome.

Zhang YE, Vibranovski MD, Landback P, Marais GA, Long M.

PLoS Biol. 2010 Oct 5;8(10). pii: e1000494. doi: 10.1371/journal.pbio.1000494.


Age-dependent chromosomal distribution of male-biased genes in Drosophila.

Zhang YE, Vibranovski MD, Krinsky BH, Long M.

Genome Res. 2010 Nov;20(11):1526-33. doi: 10.1101/gr.107334.110. Epub 2010 Aug 26.


Direct evidence for postmeiotic transcription during Drosophila melanogaster spermatogenesis.

Vibranovski MD, Chalopin DS, Lopes HF, Long M, Karr TL.

Genetics. 2010 Sep;186(1):431-3. doi: 10.1534/genetics.110.118919. Epub 2010 Jul 6.


Stage-specific expression profiling of Drosophila spermatogenesis suggests that meiotic sex chromosome inactivation drives genomic relocation of testis-expressed genes.

Vibranovski MD, Lopes HF, Karr TL, Long M.

PLoS Genet. 2009 Nov;5(11):e1000731. doi: 10.1371/journal.pgen.1000731. Epub 2009 Nov 20.

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