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Items: 1 to 20 of 51


Metabolomics reveals novel insight on dormancy of aquatic invertebrate encysted embryos.

Rozema E, Kierszniowska S, Almog-Gabai O, Wilson EG, Choi YH, Verpoorte R, Hamo R, Chalifa-Caspi V, Assaraf YG, Lubzens E.

Sci Rep. 2019 Jun 20;9(1):8878. doi: 10.1038/s41598-019-45061-x.


Streptococcus pneumoniae Cell Wall-Localized Trigger Factor Elicits a Protective Immune Response and Contributes to Bacterial Adhesion to the Host.

Cohen A, Troib S, Dotan S, Najmuldeen H, Yesilkaya H, Kushnir T, Shagan M, Portnoi M, Nachmani H, Benisty R, Tal M, Ellis R, Chalifa-Caspi V, Dagan R, Nebenzahl YM.

Sci Rep. 2019 Mar 12;9(1):4295. doi: 10.1038/s41598-019-40779-0.


CSBFinder: discovery of colinear syntenic blocks across thousands of prokaryotic genomes.

Svetlitsky D, Dagan T, Chalifa-Caspi V, Ziv-Ukelson M.

Bioinformatics. 2019 May 15;35(10):1634-1643. doi: 10.1093/bioinformatics/bty861.


Molecular Mode of Action of Asteriscus graveolens as an Anticancer Agent.

Tayeh Z, Dudai N, Schechter A, Chalifa-Caspi V, Barak S, Ofir R.

Int J Mol Sci. 2018 Jul 24;19(8). pii: E2162. doi: 10.3390/ijms19082162.


Synergistic effects of abiotic stresses in plants: a case study of nitrogen limitation and saturating light intensity in Arabidopsis thaliana.

Cohen I, Rapaport T, Chalifa-Caspi V, Rachmilevitch S.

Physiol Plant. 2019 Apr;165(4):755-767. doi: 10.1111/ppl.12765. Epub 2018 Jul 20.


Setting the pace: host rhythmic behaviour and gene expression patterns in the facultatively symbiotic cnidarian Aiptasia are determined largely by Symbiodinium.

Sorek M, Schnytzer Y, Waldman Ben-Asher H, Caspi VC, Chen CS, Miller DJ, Levy O.

Microbiome. 2018 May 9;6(1):83. doi: 10.1186/s40168-018-0465-9.


Flavin Reductase Contributes to Pneumococcal Virulence by Protecting from Oxidative Stress and Mediating Adhesion and Elicits Protection Against Pneumococcal Challenge.

Morozov GI, Porat N, Kushnir T, Najmuldeen H, Adawi A, Chalifa-Caspi V, Benisty R, Ohayon A, Liron O, Azriel S, Malka I, Dotan S, Portnoi M, Piotrowski AA, Kafka D, Hajaj B, Fishilevich T, Shagan M, Tal M, Ellis R, Morrison DA, Mitchell AM, Mitchell TJ, Dagan R, Yesilkaya H, Nebenzahl YM.

Sci Rep. 2018 Jan 10;8(1):314. doi: 10.1038/s41598-017-18645-8.


A Biclique Approach to Reference-Anchored Gene Blocks and Its Applications to Genomic Islands.

Benshahar A, Chalifa-Caspi V, Hermelin D, Ziv-Ukelson M.

J Comput Biol. 2018 Feb;25(2):214-235. doi: 10.1089/cmb.2017.0108. Epub 2017 Oct 13.


Dormancy in Embryos: Insight from Hydrated Encysted Embryos of an Aquatic Invertebrate.

Ziv T, Chalifa-Caspi V, Denekamp N, Plaschkes I, Kierszniowska S, Blais I, Admon A, Lubzens E.

Mol Cell Proteomics. 2017 Oct;16(10):1746-1769. doi: 10.1074/mcp.RA117.000109. Epub 2017 Jul 20.


The dead, hardened floral bracts of dispersal units of wild wheat function as storage for active hydrolases and in enhancing seedling vigor.

Raviv B, Granot G, Chalifa-Caspi V, Grafi G.

PLoS One. 2017 May 11;12(5):e0177537. doi: 10.1371/journal.pone.0177537. eCollection 2017.


Clinical and molecular epidemiology of Acinetobacter baumannii bloodstream infections in an endemic setting.

Marchaim D, Levit D, Zigron R, Gordon M, Lazarovitch T, Carrico JA, Chalifa-Caspi V, Moran-Gilad J.

Future Microbiol. 2017 Mar;12:271-283. doi: 10.2217/fmb-2016-0158. Epub 2017 Feb 24.


A transcriptional time-course analysis of oral vs. aboral whole-body regeneration in the Sea anemone Nematostella vectensis.

Schaffer AA, Bazarsky M, Levy K, Chalifa-Caspi V, Gat U.

BMC Genomics. 2016 Sep 7;17:718. doi: 10.1186/s12864-016-3027-1.


Streptococcus pneumoniae Cell-Wall-Localized Phosphoenolpyruvate Protein Phosphotransferase Can Function as an Adhesin: Identification of Its Host Target Molecules and Evaluation of Its Potential as a Vaccine.

Mizrachi Nebenzahl Y, Blau K, Kushnir T, Shagan M, Portnoi M, Cohen A, Azriel S, Malka I, Adawi A, Kafka D, Dotan S, Guterman G, Troib S, Fishilevich T, Gershoni JM, Braiman A, Mitchell AM, Mitchell TJ, Porat N, Goliand I, Chalifa Caspi V, Swiatlo E, Tal M, Ellis R, Elia N, Dagan R.

PLoS One. 2016 Mar 18;11(3):e0150320. doi: 10.1371/journal.pone.0150320. eCollection 2016.


The Development of a Novel qPCR Assay-Set for Identifying Fecal Contamination Originating from Domestic Fowls and Waterfowl in Israel.

Ohad S, Ben-Dor S, Prilusky J, Kravitz V, Dassa B, Chalifa-Caspi V, Kashi Y, Rorman E.

Front Microbiol. 2016 Feb 17;7:145. doi: 10.3389/fmicb.2016.00145. eCollection 2016.


Correction: Binary Gene Expression Patterning of the Molt Cycle: The Case of Chitin Metabolism.

Abehsera S, Glazer L, Tynyakov J, Plaschkes I, Chalifa-Caspi V, Khalaila I, Aflalo ED, Sagi A.

PLoS One. 2015 Jun 12;10(6):e0130787. doi: 10.1371/journal.pone.0130787. eCollection 2015. No abstract available.


Binary gene expression patterning of the molt cycle: the case of chitin metabolism.

Abehsera S, Glazer L, Tynyakov J, Plaschkes I, Chalifa-Caspi V, Khalaila I, Aflalo ED, Sagi A.

PLoS One. 2015 Apr 28;10(4):e0122602. doi: 10.1371/journal.pone.0122602. eCollection 2014. Erratum in: PLoS One. 2015;10(6):e0130787.


Comparative genomic analysis of clinical and environmental Vibrio vulnificus isolates revealed biotype 3 evolutionary relationships.

Koton Y, Gordon M, Chalifa-Caspi V, Bisharat N.

Front Microbiol. 2015 Jan 15;5:803. doi: 10.3389/fmicb.2014.00803. eCollection 2014.


Draft Genome Sequence of Fish Pathogenic Vibrio vulnificus Biotype 2.

Koton Y, Eghbaria S, Gordon M, Chalifa-Caspi V, Bisharat N.

Genome Announc. 2014 Nov 26;2(6). pii: e01224-14. doi: 10.1128/genomeA.01224-14.


A combination of gene expression ranking and co-expression network analysis increases discovery rate in large-scale mutant screens for novel Arabidopsis thaliana abiotic stress genes.

Ransbotyn V, Yeger-Lotem E, Basha O, Acuna T, Verduyn C, Gordon M, Chalifa-Caspi V, Hannah MA, Barak S.

Plant Biotechnol J. 2015 May;13(4):501-13. doi: 10.1111/pbi.12274. Epub 2014 Nov 5.


Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus).

Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M.

BMC Genomics. 2014 Sep 9;15:774. doi: 10.1186/1471-2164-15-774.

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