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Items: 1 to 20 of 61

1.

Molecular Profiling of Phagocytic Immune Cells in Anopheles gambiae Reveals Integral Roles for Hemocytes in Mosquito Innate Immunity.

Smith RC, King JG, Tao D, Zeleznik OA, Brando C, Thallinger GG, Dinglasan RR.

Mol Cell Proteomics. 2016 Nov;15(11):3373-3387.

PMID:
27624304
2.

Inferring expressed genes by whole-genome sequencing of plasma DNA.

Ulz P, Thallinger GG, Auer M, Graf R, Kashofer K, Jahn SW, Abete L, Pristauz G, Petru E, Geigl JB, Heitzer E, Speicher MR.

Nat Genet. 2016 Oct;48(10):1273-8. doi: 10.1038/ng.3648.

PMID:
27571261
3.

Curation of the genome annotation of Pichia pastoris (Komagataella phaffii) CBS7435 from gene level to protein function.

Valli M, Tatto NE, Peymann A, Gruber C, Landes N, Ekker H, Thallinger GG, Mattanovich D, Gasser B, Graf AB.

FEMS Yeast Res. 2016 Sep;16(6). pii: fow051. doi: 10.1093/femsyr/fow051.

PMID:
27388471
4.

Characterisation of Candida within the Mycobiome/Microbiome of the Lower Respiratory Tract of ICU Patients.

Krause R, Halwachs B, Thallinger GG, Klymiuk I, Gorkiewicz G, Hoenigl M, Prattes J, Valentin T, Heidrich K, Buzina W, Salzer HJ, Rabensteiner J, Prüller F, Raggam RB, Meinitzer A, Moissl-Eichinger C, Högenauer C, Quehenberger F, Kashofer K, Zollner-Schwetz I.

PLoS One. 2016 May 20;11(5):e0155033. doi: 10.1371/journal.pone.0155033.

5.

Translin and Trax differentially regulate telomere-associated transcript homeostasis.

Gomez-Escobar N, Almobadel N, Alzahrani O, Feichtinger J, Planells-Palop V, Alshehri Z, Thallinger GG, Wakeman JA, McFarlane RJ.

Oncotarget. 2016 Jun 7;7(23):33809-20. doi: 10.18632/oncotarget.9278.

6.

Comprehensive genome and epigenome characterization of CHO cells in response to evolutionary pressures and over time.

Feichtinger J, Hernández I, Fischer C, Hanscho M, Auer N, Hackl M, Jadhav V, Baumann M, Krempl PM, Schmidl C, Farlik M, Schuster M, Merkel A, Sommer A, Heath S, Rico D, Bock C, Thallinger GG, Borth N.

Biotechnol Bioeng. 2016 Oct;113(10):2241-53. doi: 10.1002/bit.25990.

7.

Dimension reduction techniques for the integrative analysis of multi-omics data.

Meng C, Zeleznik OA, Thallinger GG, Kuster B, Gholami AM, Culhane AC.

Brief Bioinform. 2016 Jul;17(4):628-41. doi: 10.1093/bib/bbv108.

8.

A Toolbox of Diverse Promoters Related to Methanol Utilization: Functionally Verified Parts for Heterologous Pathway Expression in Pichia pastoris.

Vogl T, Sturmberger L, Kickenweiz T, Wasmayer R, Schmid C, Hatzl AM, Gerstmann MA, Pitzer J, Wagner M, Thallinger GG, Geier M, Glieder A.

ACS Synth Biol. 2016 Feb 19;5(2):172-86. doi: 10.1021/acssynbio.5b00199.

PMID:
26592304
9.

Restoration of female fertility in Trichoderma reesei QM6a provides the basis for inbreeding in this industrial cellulase producing fungus.

Linke R, Thallinger GG, Haarmann T, Eidner J, Schreiter M, Lorenz P, Seiboth B, Kubicek CP.

Biotechnol Biofuels. 2015 Sep 24;8:155. doi: 10.1186/s13068-015-0311-2.

10.

ATGL and CGI-58 are lipid droplet proteins of the hepatic stellate cell line HSC-T6.

Eichmann TO, Grumet L, Taschler U, Hartler J, Heier C, Woblistin A, Pajed L, Kollroser M, Rechberger G, Thallinger GG, Zechner R, Haemmerle G, Zimmermann R, Lass A.

J Lipid Res. 2015 Oct;56(10):1972-84. doi: 10.1194/jlr.M062372.

11.

miR-199a and miR-497 Are Associated with Better Overall Survival due to Increased Chemosensitivity in Diffuse Large B-Cell Lymphoma Patients.

Troppan K, Wenzl K, Pichler M, Pursche B, Schwarzenbacher D, Feichtinger J, Thallinger GG, Beham-Schmid C, Neumeister P, Deutsch A.

Int J Mol Sci. 2015 Aug 5;16(8):18077-95. doi: 10.3390/ijms160818077.

12.

Finished Genome Sequence of Escherichia coli K-12 Strain HMS174 (ATCC 47011).

Mairhofer J, Krempl PM, Thallinger GG, Striedner G.

Genome Announc. 2014 Nov 20;2(6). pii: e00975-14. doi: 10.1128/genomeA.00975-14.

13.

Finished Genome Sequence of the Laboratory Strain Escherichia coli K-12 RV308 (ATCC 31608).

Krempl PM, Mairhofer J, Striedner G, Thallinger GG.

Genome Announc. 2014 Nov 20;2(6). pii: e00971-14. doi: 10.1128/genomeA.00971-14.

14.

Untargeted profiling of tracer-derived metabolites using stable isotopic labeling and fast polarity-switching LC-ESI-HRMS.

Kluger B, Bueschl C, Neumann N, Stückler R, Doppler M, Chassy AW, Waterhouse AL, Rechthaler J, Kampleitner N, Thallinger GG, Adam G, Krska R, Schuhmacher R.

Anal Chem. 2014 Dec 2;86(23):11533-7. doi: 10.1021/ac503290j.

15.

The Sphagnum microbiome supports bog ecosystem functioning under extreme conditions.

Bragina A, Oberauner-Wappis L, Zachow C, Halwachs B, Thallinger GG, Müller H, Berg G.

Mol Ecol. 2014 Sep;23(18):4498-510. doi: 10.1111/mec.12885.

PMID:
25113243
16.

A novel stable isotope labelling assisted workflow for improved untargeted LC-HRMS based metabolomics research.

Bueschl C, Kluger B, Lemmens M, Adam G, Wiesenberger G, Maschietto V, Marocco A, Strauss J, Bödi S, Thallinger GG, Krska R, Schuhmacher R.

Metabolomics. 2014;10(4):754-769.

17.

Integrative omics analysis. A study based on Plasmodium falciparum mRNA and protein data.

Tomescu OA, Mattanovich D, Thallinger GG.

BMC Syst Biol. 2014;8 Suppl 2:S4. doi: 10.1186/1752-0509-8-S2-S4.

18.

Enhanced whole genome sequence and annotation of Clostridium stercorarium DSM8532T using RNA-seq transcriptomics and high-throughput proteomics.

Schellenberg JJ, Verbeke TJ, McQueen P, Krokhin OV, Zhang X, Alvare G, Fristensky B, Thallinger GG, Henrissat B, Wilkins JA, Levin DB, Sparling R.

BMC Genomics. 2014 Jul 7;15:567. doi: 10.1186/1471-2164-15-567.

19.

The mzTab data exchange format: communicating mass-spectrometry-based proteomics and metabolomics experimental results to a wider audience.

Griss J, Jones AR, Sachsenberg T, Walzer M, Gatto L, Hartler J, Thallinger GG, Salek RM, Steinbeck C, Neuhauser N, Cox J, Neumann S, Fan J, Reisinger F, Xu QW, Del Toro N, Pérez-Riverol Y, Ghali F, Bandeira N, Xenarios I, Kohlbacher O, Vizcaíno JA, Hermjakob H.

Mol Cell Proteomics. 2014 Oct;13(10):2765-75. doi: 10.1074/mcp.O113.036681.

20.

Stenotrophomonas comparative genomics reveals genes and functions that differentiate beneficial and pathogenic bacteria.

Alavi P, Starcher MR, Thallinger GG, Zachow C, Müller H, Berg G.

BMC Genomics. 2014 Jun 18;15:482. doi: 10.1186/1471-2164-15-482.

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