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Items: 1 to 20 of 89

1.

Improved reference genome of Aedes aegypti informs arbovirus vector control.

Matthews BJ, Dudchenko O, Kingan SB, Koren S, Antoshechkin I, Crawford JE, Glassford WJ, Herre M, Redmond SN, Rose NH, Weedall GD, Wu Y, Batra SS, Brito-Sierra CA, Buckingham SD, Campbell CL, Chan S, Cox E, Evans BR, Fansiri T, Filipović I, Fontaine A, Gloria-Soria A, Hall R, Joardar VS, Jones AK, Kay RGG, Kodali VK, Lee J, Lycett GJ, Mitchell SN, Muehling J, Murphy MR, Omer AD, Partridge FA, Peluso P, Aiden AP, Ramasamy V, Rašić G, Roy S, Saavedra-Rodriguez K, Sharan S, Sharma A, Smith ML, Turner J, Weakley AM, Zhao Z, Akbari OS, Black WC 4th, Cao H, Darby AC, Hill CA, Johnston JS, Murphy TD, Raikhel AS, Sattelle DB, Sharakhov IV, White BJ, Zhao L, Aiden EL, Mann RS, Lambrechts L, Powell JR, Sharakhova MV, Tu Z, Robertson HM, McBride CS, Hastie AR, Korlach J, Neafsey DE, Phillippy AM, Vosshall LB.

Nature. 2018 Nov;563(7732):501-507. doi: 10.1038/s41586-018-0692-z. Epub 2018 Nov 14.

PMID:
30429615
2.

Physical Genome Mapping Using Fluorescence In Situ Hybridization with Mosquito Chromosomes.

Sharakhova MV, Artemov GN, Timoshevskiy VA, Sharakhov IV.

Methods Mol Biol. 2019;1858:177-194. doi: 10.1007/978-1-4939-8775-7_13.

PMID:
30414118
3.

The Development of Cytogenetic Maps for Malaria Mosquitoes.

Artemov GN, Stegniy VN, Sharakhova MV, Sharakhov IV.

Insects. 2018 Sep 17;9(3). pii: E121. doi: 10.3390/insects9030121.

4.

A standard photomap of the ovarian nurse cell chromosomes for the dominant malaria vector in Europe and Middle East Anopheles sacharovi.

Artemov GN, Velichevskaya AI, Bondarenko SM, Karagyan GH, Aghayan SA, Arakelyan MS, Stegniy VN, Sharakhov IV, Sharakhova MV.

Malar J. 2018 Jul 30;17(1):276. doi: 10.1186/s12936-018-2428-9.

5.

Partial-arm translocations in evolution of malaria mosquitoes revealed by high-coverage physical mapping of the Anopheles atroparvus genome.

Artemov GN, Bondarenko SM, Naumenko AN, Stegniy VN, Sharakhova MV, Sharakhov IV.

BMC Genomics. 2018 Apr 23;19(1):278. doi: 10.1186/s12864-018-4663-4.

6.

The Role of Chromosome-Nuclear Envelope Attachments in 3D Genome Organization.

Sharakhov IV, Bondarenko SM, Artemov GN, Onufriev AV.

Biochemistry (Mosc). 2018 Apr;83(4):350-358. doi: 10.1134/S0006297918040065. Review.

7.

A standard photomap of ovarian nurse cell chromosomes and inversion polymorphism in Anopheles beklemishevi.

Artemov GN, Gordeev MI, Kokhanenko AA, Moskaev AV, Velichevskaya AI, Stegniy VN, Sharakhov IV, Sharakhova MV.

Parasit Vectors. 2018 Mar 27;11(1):211. doi: 10.1186/s13071-018-2657-3.

8.

Chromosome-nuclear envelope attachments affect interphase chromosome territories and entanglement.

Kinney NA, Sharakhov IV, Onufriev AV.

Epigenetics Chromatin. 2018 Jan 22;11(1):3. doi: 10.1186/s13072-018-0173-5.

9.

Analysis of the Aedes albopictus C6/36 genome provides insight into cell line utility for viral propagation.

Miller JR, Koren S, Dilley KA, Puri V, Brown DM, Harkins DM, Thibaud-Nissen F, Rosen B, Chen XG, Tu Z, Sharakhov IV, Sharakhova MV, Sebra R, Stockwell TB, Bergman NH, Sutton GG, Phillippy AM, Piermarini PM, Shabman RS.

Gigascience. 2018 Mar 1;7(3):1-13. doi: 10.1093/gigascience/gix135.

10.

Genetic diversity of the African malaria vector Anopheles gambiae.

Anopheles gambiae 1000 Genomes Consortium; Data analysis group; Partner working group; Sample collections—Angola:; Burkina Faso:; Cameroon:; Gabon:; Guinea:; Guinea-Bissau:; Kenya:; Uganda:; Crosses:; Sequencing and data production; Web application development; Project coordination.

Nature. 2017 Dec 7;552(7683):96-100. doi: 10.1038/nature24995. Epub 2017 Nov 29.

11.

Mapping Genomic Scaffolds to Chromosomes Using Laser Capture Microdissection in Application to Hawaiian Picture-Winged Drosophila.

Kang L, George P, Price DK, Sharakhov I, Michalak P.

Cytogenet Genome Res. 2017;152(4):204-212. doi: 10.1159/000481790. Epub 2017 Nov 8.

12.

Comparative physical genome mapping of malaria vectors Anopheles sinensis and Anopheles gambiae.

Wei Y, Cheng B, Zhu G, Shen D, Liang J, Wang C, Wang J, Tang J, Cao J, Sharakhov IV, Xia A.

Malar J. 2017 Jun 5;16(1):235. doi: 10.1186/s12936-017-1888-7.

13.

Tissue-specific features of the X chromosome and nucleolus spatial dynamics in a malaria mosquito, Anopheles atroparvus.

Bondarenko SM, Artemov GN, Sharakhov IV, Stegniy VN.

PLoS One. 2017 Feb 3;12(2):e0171290. doi: 10.1371/journal.pone.0171290. eCollection 2017.

14.

Integrating transcriptomic and proteomic data for accurate assembly and annotation of genomes.

Prasad TS, Mohanty AK, Kumar M, Sreenivasamurthy SK, Dey G, Nirujogi RS, Pinto SM, Madugundu AK, Patil AH, Advani J, Manda SS, Gupta MK, Dwivedi SB, Kelkar DS, Hall B, Jiang X, Peery A, Rajagopalan P, Yelamanchi SD, Solanki HS, Raja R, Sathe GJ, Chavan S, Verma R, Patel KM, Jain AP, Syed N, Datta KK, Khan AA, Dammalli M, Jayaram S, Radhakrishnan A, Mitchell CJ, Na CH, Kumar N, Sinnis P, Sharakhov IV, Wang C, Gowda H, Tu Z, Kumar A, Pandey A.

Genome Res. 2017 Jan;27(1):133-144. doi: 10.1101/gr.201368.115. Epub 2016 Nov 15.

15.

Structural divergence of chromosomes between malaria vectors Anopheles lesteri and Anopheles sinensis.

Liang J, Cheng B, Zhu G, Wei Y, Tang J, Cao J, Ma Y, Sharakhova MV, Xia A, Sharakhov IV.

Parasit Vectors. 2016 Nov 25;9(1):608.

16.

The Physical Genome Mapping of Anopheles albimanus Corrected Scaffold Misassemblies and Identified Interarm Rearrangements in Genus Anopheles.

Artemov GN, Peery AN, Jiang X, Tu Z, Stegniy VN, Sharakhova MV, Sharakhov IV.

G3 (Bethesda). 2017 Jan 5;7(1):155-164. doi: 10.1534/g3.116.034959.

17.

INFESTATION OF HONEYBEE (APIS MELLIFERA) FAMILIES BY MICROSPORIDIANS OF THE GENUS NOSEMA IN TOMSK PROVINCE

Ostroverkhova NV, Konusova OL, Kucher AN, Simakova AV, Golubeva EP, Kireeva TN, Sharakhov IV.

Parazitologiia. 2016 May-Jun;50(3):197-210.

PMID:
29115110
18.

Radical remodeling of the Y chromosome in a recent radiation of malaria mosquitoes.

Hall AB, Papathanos PA, Sharma A, Cheng C, Akbari OS, Assour L, Bergman NH, Cagnetti A, Crisanti A, Dottorini T, Fiorentini E, Galizi R, Hnath J, Jiang X, Koren S, Nolan T, Radune D, Sharakhova MV, Steele A, Timoshevskiy VA, Windbichler N, Zhang S, Hahn MW, Phillippy AM, Emrich SJ, Sharakhov IV, Tu ZJ, Besansky NJ.

Proc Natl Acad Sci U S A. 2016 Apr 12;113(15):E2114-23. doi: 10.1073/pnas.1525164113. Epub 2016 Mar 29.

19.

Chromosome evolution in malaria mosquitoes inferred from physically mapped genome assemblies.

Sharakhov IV, Artemov GN, Sharakhova MV.

J Bioinform Comput Biol. 2016 Apr;14(2):1630003. doi: 10.1142/S0219720016300033. Epub 2016 Jan 28.

PMID:
27021248
20.

Increased production of piRNAs from euchromatic clusters and genes in Anopheles gambiae compared with Drosophila melanogaster.

George P, Jensen S, Pogorelcnik R, Lee J, Xing Y, Brasset E, Vaury C, Sharakhov IV.

Epigenetics Chromatin. 2015 Nov 27;8:50. doi: 10.1186/s13072-015-0041-5. eCollection 2015.

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